Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2382 ATGCCCCACTTTCATATTGTATCTGTACCTCACGAATTTCGGACGCTTGCTTCGTCAATTATCAAGAGTGTCATGGCATATGAATTCTTACGTAAACCCAATGCACCACGTCATCTGTGGATCAGAATAGACAGGAAAGGCAATACCAGCAAACGTGCGCGGAAGGTCATGAAGTGCCTATGCTCAGAAAAGCCATCAAGTGAAGAAGATGATGCGGTTCCTTCATCTGAATCTCTTGCAACCGAGGGTTGTTTGAACAATGAGGAAGGCAGAGCTCGTTTAGGGAAATATGAATATCAGAAAGGAAATATAGAAGCTGCTTTACACGTTTTTGAGCGAATAGATACAGAGGCTGTAGCTTCCATGATTAAAAATTCTCTTGCCAGAAGGGGGAAGCGCCACAAGAGACTTCCCCAGAATTATGCTATGGGGTCATTGTCTATTCATTCTATTAACTTACTGTTGGAAGCTTTCTTCCTTAAAGCAAAGTCTTTAGAGGCTCTTGGAAAGTTTAAAGAAGCTTCCCTATCTTGCAAAGTTATTCTGGACACGGTTGAATCTTCATTCCTGCAAGGCTTGCCTGAAAATTTTGGTCTTGGATAAACCACAGCAAAGATTCAGAAAGAGCTTATCGTTTTTCTTCTTTTTAGTGGAGAGGAAGCTAGTCCTCCCAGTCTTCTTTCCCAAATGGAAACTTCATACGTACCCAGAAATAACATAGAAGAGGCTATACTTCTTTTGATGATTCTGCTAAGACAGGTCTGTTCCAATAGAATTGGGTGGGATCCTTCAATTTTGGACCATCTTTCATTTGCTTTGTCTGTTTCAGGGGATTTGAAAGCTTTAGCCAATCAATTGGAACAATTGCTCCCCACCACTATCAATCCAACAGAGAAGTGCCTAGCACTTGCCTTCTGTCATTACGGAGCAGGTCAGGACTTGGTGGCATTGGGACTTCTTAGAAAATTGTTATGCATCAAAGAGGACTCAAACCATATTTTAGCTTTGTTGGCTTCAAAAATTTGTTGTGAGAACCCTAGTCTTGCTGGAGAAGGGATAAGTCTTGCTTGTAGATTTCTTGAGAAATTGGAAGGTAGATGTGATCAGCTAGCAAGTTGTGCCAATTGCTTCCTTGGTCTTTCGCTTTCAGCACATTCAAAATCGTCCATTTCTGATTCTGAAAGGTATAAAAGACAATCTGAGGCACTTCACTACCTGGAAATTGCCTCCAGAATGTCCAGAATGAGAAACCCCCTGATATTATACCATCTCAGTTTAGAATATGCTGAGCAGAGAAAGTTGGATGATGCCCTTGATTATGCTAAATGCTTGCTAGAACTGGAAGCAGGGTCTAATATTAAAGGGTGGCTACTATTAGCCAGAATATTATCAGCTCAAAGTCGATTATTGGACGCTGAATCTGTTATCAACGCTGCTTTGGACCAGACTGGGAAATGGGATCAAGGAAATTTGCTGCGAACAAAAGCTAAACTTCAGATTGCACAGGGCCATTTAAGGAGTGGCATGGAAACTTATATTCAGCTTCTTGCTGTTCTTCAAATTCAGAGCTTAAACTTTGGTTCTGAGAATGAGTTAAATAAGGACATCAAAGCTGATACCCAGAGATTGGAAATGGAAATATGGCATGATCTTGCTATCTTATACATAAGCCAGTCAAAATGGCAAGATGCAGAAGCGTGTCTTGCAAAGTCTAAGGCCATCAAACTTTACTCAGCTCCTAGATGTCATGCAACTGGTCTAATATATGAAGCAAAGGGCCTTTACAAAGAGGCTGTAAAAGCTTTTCGTCAAGCTTTGGATATTGATCCCAACTACGTCCCAAGCTTGATTTCTGTTGCTTTGGTTCTCAGAAGGTGCAGTGACAAATCGAATGCCGCAGTTCGAGGCTATCTGATGGATGCTCTACGGCATGACAGAATGAATGCTTCTGCTTGGTACCATCTTGGCCTTCTTCATAAGGCTGAGGGTACAATATCCTCATTAATTGAAGCCATGGAATGCTTCGAGGCTGCACACCATCTTGAAGAAACTGCTCCAGTTGAGGCTTTCAGATGA 2076 0.4167 MPHFHIVSVPHEFRTLASSIIKSVMAYEFLRKPNAPRHLWIRIDRKGNTSKRARKVMKCLCSEKPSSEEDDAVPSSESLATEGCLNNEEGRARLGKYEYQKGNIEAALHVFERIDTEAVASMIKNSLARRGKRHKRLPQNYAMGSLSIHSINLLLEAFFLKAKSLEALGKFKEASLSCKVILDTVESSFLQGLPENFGLGXTTAKIQKELIVFLLFSGEEASPPSLLSQMETSYVPRNNIEEAILLLMILLRQVCSNRIGWDPSILDHLSFALSVSGDLKALANQLEQLLPTTINPTEKCLALAFCHYGAGQDLVALGLLRKLLCIKEDSNHILALLASKICCENPSLAGEGISLACRFLEKLEGRCDQLASCANCFLGLSLSAHSKSSISDSERYKRQSEALHYLEIASRMSRMRNPLILYHLSLEYAEQRKLDDALDYAKCLLELEAGSNIKGWLLLARILSAQSRLLDAESVINAALDQTGKWDQGNLLRTKAKLQIAQGHLRSGMETYIQLLAVLQIQSLNFGSENELNKDIKADTQRLEMEIWHDLAILYISQSKWQDAEACLAKSKAIKLYSAPRCHATGLIYEAKGLYKEAVKAFRQALDIDPNYVPSLISVALVLRRCSDKSNAAVRGYLMDALRHDRMNASAWYHLGLLHKAEGTISSLIEAMECFEAAHHLEETAPVEAFR 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2382 691 SUPERFAMILY TPR-like 394 465 IPR011990 GO:0005515
Mibi06g2382 691 Gene3D Tetratricopeptide repeat domain 76 523 IPR011990 GO:0005515
Mibi06g2382 691 SUPERFAMILY TPR-like 544 663 IPR011990 GO:0005515
Mibi06g2382 691 ProSiteProfiles TPR repeat profile. 579 612 IPR019734 GO:0005515
Mibi06g2382 691 SMART tpr_5 418 451 IPR019734 GO:0005515
Mibi06g2382 691 SMART tpr_5 579 612 IPR019734 GO:0005515
Mibi06g2382 691 SMART tpr_5 545 578 IPR019734 GO:0005515
Mibi06g2382 691 SMART tpr_5 453 486 IPR019734 GO:0005515
Mibi06g2382 691 SMART tpr_5 155 188 IPR019734 GO:0005515
Mibi06g2382 691 SMART tpr_5 649 685 IPR019734 GO:0005515
Mibi06g2382 691 Pfam Tetratricopeptide repeat 426 482 - -
Mibi06g2382 691 Gene3D - 529 689 - -
Mibi06g2382 691 Pfam Tetratricopeptide repeat 582 612 IPR013105 -
Mibi06g2382 691 PANTHER PROTEIN NPG1 202 691 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2382 Mibi-ChrMibi06 44049892 44056793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2382 78 691 Calmodulin-binding Proteins AT4G28600 48.580 0.0 553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2382 06 44049892 44056793 Mibi02g1562 02 15500829 15506837 CCT