Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2373 ATGGATTCACTGCCAATTTCTTATTCTTCTAGTAGTGGACCGTTTTCTTCTTCCACACCAAATAATTATTTCAAAGAAAACAGTGCTTCCTGGAATATAGAACCCCTGCCCAACTTTCTTGATTTCCCTTCAAATACTACCATCGAGAATAGTCTAGCAGAAAATGGTGCCTGCACTGTCATGGCAGCTGAGGAGTACAATAAGCAAAATGAATGGCAAGAGTGGGCTGACCAGCTTATAAGTGAAGATGACCCTTTGACTTCTAATTGGAATGACCTTCTTATTGAAAATGTTCAAGATCTTGAACCAAAGGTGGGATACCAGGTTCCACATATTCCAGGAAACCAATCCCAAGGCCAGCATCTACTTCCAGCTTCATCTGGAGACAATTGCTTTGGTGCTCCACCAGCTTCCTCTTCAAGTTCTACTCCTGCCAAGCCACGGATGCGCTGGACACCGGAGCTTCATGAGGCCTTTGTGGAGGCTGTGAACAAACTTGGTGGCAGTGAAAGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGTCACTTGCAGAAATACAGGACTGCTAGATATAGACCGGAACCATCTGAAGGATCTTCGGAGAAGTGGGTAGCTTCCATTGAAAATATGCCTCATCTAGACCTGAAAACTGGTATTGAGATCACTGAAGCTCTGCGACTGCAGATGGAGGTTCAGAAGCGGTTGCATGAACAACTTGAGATTCAACGAAACTTACAGCTGCGGATAGAAGAACAAGGAAGGCACCTTCAGATGATGTTTGAGAAGCAATGCAAATCTGGTGCTGACATGAAGGCATCACCAGCTTCTGCCATAGAGAATCCATCTGTAGTGTCCTCAGATGCTATCAAAGATTGTCCTGCCAAAGATGAAGTGGAAGCGTCCCAAGCGGAGGGCAATTGCAAGTTGGGACGTGATCAAGCTAATAGTAGTAGTGCAGTTGAGGAAAGCTCTGTGGAAGTGGGTATGAAGAATGATGGTCCTGAAAATCAAGCTTTTGAGAATGTTAAGCAACAAACCAGTGAAGAGAGTGATCCAGCCTCTAAGAGGCAGAGGACAGAAGAGTAA 1122 0.4447 MDSLPISYSSSSGPFSSSTPNNYFKENSASWNIEPLPNFLDFPSNTTIENSLAENGACTVMAAEEYNKQNEWQEWADQLISEDDPLTSNWNDLLIENVQDLEPKVGYQVPHIPGNQSQGQHLLPASSGDNCFGAPPASSSSSTPAKPRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPEPSEGSSEKWVASIENMPHLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRHLQMMFEKQCKSGADMKASPASAIENPSVVSSDAIKDCPAKDEVEASQAEGNCKLGRDQANSSSAVEESSVEVGMKNDGPENQAFENVKQQTSEESDPASKRQRTEE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2373 373 SUPERFAMILY Homeodomain-like 143 200 IPR009057 -
Mibi06g2373 373 FunFam Myb family transcription factor 145 203 - -
Mibi06g2373 373 Coils Coil 234 254 - -
Mibi06g2373 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 143 203 IPR017930 -
Mibi06g2373 373 Gene3D - 145 204 - -
Mibi06g2373 373 MobiDBLite consensus disorder prediction 1 21 - -
Mibi06g2373 373 MobiDBLite consensus disorder prediction 277 296 - -
Mibi06g2373 373 Pfam Myb-like DNA-binding domain 148 199 IPR001005 -
Mibi06g2373 373 MobiDBLite consensus disorder prediction 320 336 - -
Mibi06g2373 373 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 146 200 IPR006447 GO:0003677
Mibi06g2373 373 Pfam MYB-CC type transfactor, LHEQLE motif 231 278 IPR025756 -
Mibi06g2373 373 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 130 364 IPR044848 GO:0003700
Mibi06g2373 373 MobiDBLite consensus disorder prediction 305 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2373 Mibi-ChrMibi06 43957320 43959934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2373 8 275 G2-like Transcription Factor Family AT4G28610 56.679 1.36e-91 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi06g2373 Myb_DNA-binding 3.4e-09 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1557 02 15454518 15461632 Mibi06g2373 06 43957320 43959934 CCT
Mibi06g2373 06 43957320 43959934 Mibi06g2373 06 43957320 43959934 ECH
Mibi02g1557 02 15454518 15461632 Mibi06g2373 06 43957320 43959934 ECH