Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2368 ATGTGGGGTCATTCCATAATCACTACCCCTTCTTTACCACGGCACCTATCCTCCTTCCTCAACAACACACCTAATCTCACCATTTATCCTTCCTTTCCTTTCACTCTGCTTTTCCAAACACACTACCACCCATACCATACCTTTCTCTCTCTCCTTTCTCTCCCCCCTCGTTTTCTGCTTCACCTTCAGCTTTCTCTTTTCTGGGCTTCAGAGGAATCTGCTATGCAGGGTGATTGTTCTCCGGATTCGATGGTCACAGAGTCTAAGGAGGATAACGTGGTCCTTTCTTCTGAGGATTCGTCTTGCCCTCATGAGTCTGACCTTGAATTGGGTCTTGGCTTGAGCCTTTCTCATCCACCACCACCTCCCACGACTCACTATGCTCGAATTTTGACGGCCATGGATTTTTCTTCCTCACCTTCCTCCTCCTCTGCCTCCTCTTCCTCTCCTAACCTGACAGCTGGCACCAAGAGAGCTGCTGATTCTCTTGTCCCTTCAAACGGTCCTAGTCAAGTTGTTGGATGGCCTCCGCTTCGAGCATATAGAATGAACAGCTTTAATAATAATCACTCAAAATCTCCAACCACTGAAGCTAAGAGTAATCAAACAGCTGCAATAAAGATTACTGACTATGGCGCTGATAAAAACAATAGTATTGCCAAAGAAAAAGCACACATAAGGAGATCCCTATTTGTTAAGGTAAATATGGATGGGACACCAATTGGAAGAAAGGTTGATTTGAGTGCTCATAGTTCCTACGAAACCCTGGCACATACTTTGGAGGATATGTTTAATGAGCCGAACCCAGCTGTCACCAAAGGATCAAATGGGGAGGATTGTGGTTTTGTCGTTGGAGCAAAAAAGAGACACTTAAATTTGCTGGATGAATCTTCCAATTTTGTGCTGACTTATGAAGACAAAGAAGGAGACTGGATGCTTGTTGGAGATGTTCCTTGGGATATGTTTTTTAGTTCTGTGAGGAGGCTTAGAATTATGAAGGCGTCTGAGGCAAATGGACTGGCGCCAAGATTGGAGGAAAAGAAGAGCAGACTGAGAAGTTAG 1062 0.4473 MWGHSIITTPSLPRHLSSFLNNTPNLTIYPSFPFTLLFQTHYHPYHTFLSLLSLPPRFLLHLQLSLFWASEESAMQGDCSPDSMVTESKEDNVVLSSEDSSCPHESDLELGLGLSLSHPPPPPTTHYARILTAMDFSSSPSSSSASSSSPNLTAGTKRAADSLVPSNGPSQVVGWPPLRAYRMNSFNNNHSKSPTTEAKSNQTAAIKITDYGADKNNSIAKEKAHIRRSLFVKVNMDGTPIGRKVDLSAHSSYETLAHTLEDMFNEPNPAVTKGSNGEDCGFVVGAKKRHLNLLDESSNFVLTYEDKEGDWMLVGDVPWDMFFSSVRRLRIMKASEANGLAPRLEEKKSRLRS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2368 353 MobiDBLite consensus disorder prediction 78 124 - -
Mibi06g2368 353 Pfam AUX/IAA family 141 343 IPR033389 -
Mibi06g2368 353 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 107 339 IPR003311 GO:0005634|GO:0006355
Mibi06g2368 353 MobiDBLite consensus disorder prediction 139 156 - -
Mibi06g2368 353 ProSiteProfiles PB1 domain profile. 229 334 IPR000270 GO:0005515
Mibi06g2368 353 MobiDBLite consensus disorder prediction 139 171 - -
Mibi06g2368 353 MobiDBLite consensus disorder prediction 78 101 - -
Mibi06g2368 353 FunFam Auxin-responsive protein 224 344 - -
Mibi06g2368 353 SUPERFAMILY CAD & PB1 domains 226 333 - -
Mibi06g2368 353 Gene3D - 224 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2368 Mibi-ChrMibi06 43920960 43923595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2368 233 343 B3 DNA Binding Superfamily AT1G59750 32.432 5.85e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi06g2368 AUX_IAA 8e-62 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1545 02 15378676 15381378 Mibi06g2368 06 43920960 43923595 CCT
Mibi06g2368 06 43920960 43923595 Mibi06g2368 06 43920960 43923595 ECH