Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2357 ATGGCCACTCTCACCTGCTCCGCCGCCGATCTCCAGCCGCTTCTTTCGAACGCCGCCGCCGCCGATTACATCTGCCAACGCTTCCAACACATCTCCGACAACCTCGTCGACACCGCCTACGCCGTGGACAATACCTACCTTCTCTTCTCCGCCTACCTCGTCTTCGCCATGCAGCTAGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGAGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTTGACGCCGCCACCGGCGCCATCTTCTACTACCTCTTCGGTTTCGCCTTCTCCTTCGGTTCCCCTTCCAATGCTTTCGTAGGTTACCACTTCTTCGCCCTCCACAAATTCCCCTCTCCCTCCTTCGATTACCCCTTTTTCCTCTACCAATGGGCTTTTGCCATCGCTGCCGCCGGAATCACCAGCGGTTCCATTGCCGAGAGGACTCAATTCGTCGCCTATTTGCTTTACTCTTCCTTCTTAACTGGTCTCGTTTATCCCATTGTCTCTCACTGGTTCTGGTCTCCCCATGGCTGGGCCAGTGCTGCTAGATCTCACAATCTCTTGTTCGGCTCCGGCGTCATCGATTTCGCCGGCTCCGGCGTCGTTCACATGGTGGGGGCCATTGCCGGATTCTGGGGAGCATTCATTGAGGGCCCACGCATAGGGAGATTCGATCACGAAGGGAAGCCTGTGGTCATGAGAGGGCACAGTGGAACCTTGGTTGTTTTGGGCACCTTTTTGCTGTGGTTTGGATGGTACGGATTCAACCCTGGATCGTTTGTGACCATCTTGAAGGCTTATGGCGCTTCGGGTTCTTACTATGGGCAGTGGAGTGCGGTGGGGAGAACCGCCGTGACGACTACTATGGCGGGTTGTGCGGCGGCGCTGACCACCCTGTTCGGGAAACGGCTTTTGAGTGGCCATTGGAATGTGACAGATGTGTGTAATGGGTTGCTTGGAGGATTCGCTGCCATAACCTCTGGTTGCTCTGTGGTGGATCCATGGGCGGCGCTTCTGTGTGGGTTTGTGGCGGCCTGGGTGCTTATTGGATTCAACAGGTTGGCAGAGAGGTTTGGGTATGATGATCCACTGGAGGCTGCACAGCTTCATGGAGGTTGTGGGGCATGGGGGATAATCTTCACAGCGTTGTTTGCGAAGAAGGAGTATGTGAATGAGGTGTATCCAGGGGTTGATGGTAGGCCGTTTGGTTTGTTGATGGGAGGGGGATGGGGACTATTGGGGGCACATATTGTTCAGATTTTGGTGATTGTGGCTTGGGTTAGTCTTACTATGGGGTCGCTTTTCTTTATACTTCATAAGTTGAAGCTTTTGAGGAGCTCGCCCGACGAGGAAATGGCTGGATTGGATCTTACTAGTCATGGTGGATTGGCTTATGAGTATAATAACGAGGAGATTGAGCTTGCTCAAAAAGGTGCATTTGGGACAATGAGGAGGAGGGCTTCTTCTGGTGTTTAA 1485 0.5394 MATLTCSAADLQPLLSNAAAADYICQRFQHISDNLVDTAYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGAIFYYLFGFAFSFGSPSNAFVGYHFFALHKFPSPSFDYPFFLYQWAFAIAAAGITSGSIAERTQFVAYLLYSSFLTGLVYPIVSHWFWSPHGWASAARSHNLLFGSGVIDFAGSGVVHMVGAIAGFWGAFIEGPRIGRFDHEGKPVVMRGHSGTLVVLGTFLLWFGWYGFNPGSFVTILKAYGASGSYYGQWSAVGRTAVTTTMAGCAAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITSGCSVVDPWAALLCGFVAAWVLIGFNRLAERFGYDDPLEAAQLHGGCGAWGIIFTALFAKKEYVNEVYPGVDGRPFGLLMGGGWGLLGAHIVQILVIVAWVSLTMGSLFFILHKLKLLRSSPDEEMAGLDLTSHGGLAYEYNNEEIELAQKGAFGTMRRRASSGV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2357 494 FunFam Ammonium transporter 24 482 - -
Mibi06g2357 494 Pfam Ammonium Transporter Family 46 468 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mibi06g2357 494 ProSitePatterns Ammonium transporters signature. 198 223 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mibi06g2357 494 Gene3D Ammonium transporter AmtB like domains 21 483 IPR029020 -
Mibi06g2357 494 TIGRFAM amt: ammonium transporter 43 468 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mibi06g2357 494 SUPERFAMILY Ammonium transporter 40 448 - -
Mibi06g2357 494 PANTHER AMMONIUM TRANSPORTER 10 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2357 Mibi-ChrMibi06 43823152 43824636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2357 2 489 Inorganic Solute Cotransporters AT4G28700 75.855 0.0 736