Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2351 ATGCCAACTTCGATCGTCTTCCTCCTTGTTCTTCTCAACTTGCTTATCTCTTGCTCAGGTTATTTCTCTTTCCCAATACTCATGTCTCCTTCTCCAAAACCCCACCAGGCATTATCTGTCAGGGAAATGTTATTTAAGCAGGTGAAGTCAGGTTCCTCTAGTGTATTGTTTGCTTCGCGTGAACCTGCTAAAACTTGGTTGCTTAAGCCTTCATTGGCACCTGCACCATCTCCAACTGGTCAAGGTCCCAGTGTGAGTCCTAGACTGAGACATCATCACCATTTTCATCACCACCGCGGTGTAAGACCTCATGTAGTAGCTCCATCTCCTTCTAAAGATCAAGGTTGTGACCAAATATGCGTTGATCCACTCACAGCGACCCCCTATGGTTCACCTTGTGGCTGTGTCTTTCCCATGAAAGTCAAACTTCTTTTGGATGTTGCACCTTATTCGATCTTTCCATTAATGAACGAGTTAGAGATTGAGGTTGCATCAGGCACATATTTGGAACAGAGCCAGGTGAAGATAATGGGTGCAAGTGCTGACAGTCAAAATCAGGGGAAAACTGTAATTGATATGAACTTGGTTCCACTAGGAGAGAAGTTTGACAACACCACTGCAGTTCTGATATATGATAGGTTTTGGCATAAGAAAGTTCCTCTGGAAGAGAGCCTTTTTGGTGATTATGCAGTCTTGTCCATTAGTTATCCAGGGATTCCATCATCACCGCCATATGGAAGCAATGCTGGAAGCGGTCCTAGTGGGAGTGCCGACAGACTTCCTATCACTGCCAACTTTGTCAGCAAGAACCCGAAAATGAATTTTAGAACCATAGTCATCATTGCTTTATCTGCCTTTGTACTTATGATGGTTTTGACTGGAGCATTTTTCATTGTGTTGAAATGGAGGAGGGTTAGGAGACCATCAAGTGCTGTTGGTCCTGCATTTACTTCCTCTATAAACAAGCGATCTGGCATGGGATCCATGTTGTCAAGTAGCATTACAAGCTCAACATCGGTGTCCCTTATGTCCACCATGGCTACTTCTATTCTCTCTGTCAGAACATTTTCACTTTCCGAGCTCGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTATTAGGAGAAGGGGGATTTGGGCGTGTTTATAGTGGTACATTGGAAGATGGAACTGAAGTAGCAGTTAAGCTGCTAACAAAGGATAATCAGAATGGTGACCGTGAGTTTATTGCAGAAGTTGAGATGCTAAGCCGCTTGCATCATCGAAATCTTGTGAAACTCATTGGTATCTGCATTGAAGGGCGTAGACGGTGTTTGGTGTATGAGCTAGTTCACAATGGCAGTGTTGAGTCCCATTTGCATGGTGTTGAGAAGAAGGGCCCTCTTGATTGGGAAGCGAGGATGAAAATTGCTCTTGGAGCGGCAAGAGGGTTGGCCTATCTTCATGAAGACTCTAATCCTCGTGTAATTCATCGAGACTTTAAAGCTAGTAATGTGTTATTAGAGGATGATTTCACCCCTAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGAAGTCATCATATTTCTACGCGTGTCATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTAGTTAAGAGTGATGTTTATAGCTACGGGGTAGTGCTGCTCGAACTTCTTACTGGCAGAAAACCGGTGGACATGTCTCAACCTCCTGGACAGGAGAATCTAGTGACATGGGCAAGGCCACTCTTGACAAGTAGAGAAGGCTTAGAACAGCTAGTGGATCCATCTTTAGCTGGAAGTTATGACTTTGATGACATGGCAAAGGTGGCCGCCATCGCCTCCATGTGTGTCCACCCCGAGGTCACTCAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTGAAATTGATATACAATGACACAGATGAGACTTGTGGGGATTGCTGTAGTCAGAAGGAATCTTCTGCTCAAGAATCTGATATAAGAGCTGATCTTGTTCCTTCAGATAGTAGTTGGTGGAATGCTGGAGGGGTGACCCCAAGGTTAACTTATGGTCAAGCGTCTTCCTTCATCACAATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTATTGGGAGACGAGATATCTTCACCGATTATGCATGGGAACAGATCAGGGCCCTTGAGATCAGTCCGAAGTAAGCTATCTTTGCATAGATTTACCGGAAGTCGGAGTGAACATGGGGGACTTCCTTCCAAGCGTGGTCTAAACGAGGGTTTCTGGGTTTAA 2313 0.4453 MPTSIVFLLVLLNLLISCSGYFSFPILMSPSPKPHQALSVREMLFKQVKSGSSSVLFASREPAKTWLLKPSLAPAPSPTGQGPSVSPRLRHHHHFHHHRGVRPHVVAPSPSKDQGCDQICVDPLTATPYGSPCGCVFPMKVKLLLDVAPYSIFPLMNELEIEVASGTYLEQSQVKIMGASADSQNQGKTVIDMNLVPLGEKFDNTTAVLIYDRFWHKKVPLEESLFGDYAVLSISYPGIPSSPPYGSNAGSGPSGSADRLPITANFVSKNPKMNFRTIVIIALSAFVLMMVLTGAFFIVLKWRRVRRPSSAVGPAFTSSINKRSGMGSMLSSSITSSTSVSLMSTMATSILSVRTFSLSELEKATDKFSSKRVLGEGGFGRVYSGTLEDGTEVAVKLLTKDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHGVEKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCGDCCSQKESSAQESDIRADLVPSDSSWWNAGGVTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLLGDEISSPIMHGNRSGPLRSVRSKLSLHRFTGSRSEHGGLPSKRGLNEGFWV 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2351 770 FunFam Receptor-like serine/threonine-protein kinase ALE2 444 661 - -
Mibi06g2351 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Mibi06g2351 770 Pfam Protein tyrosine and serine/threonine kinase 370 639 IPR001245 GO:0004672|GO:0006468
Mibi06g2351 770 SUPERFAMILY Protein kinase-like (PK-like) 352 640 IPR011009 -
Mibi06g2351 770 Gene3D Transferase(Phosphotransferase) domain 1 444 665 - -
Mibi06g2351 770 PANTHER OS01G0750732 PROTEIN 109 664 - -
Mibi06g2351 770 Gene3D Phosphorylase Kinase; domain 1 339 443 - -
Mibi06g2351 770 FunFam receptor-like serine/threonine-protein kinase ALE2 341 443 - -
Mibi06g2351 770 CDD STKc_IRAK 374 642 - -
Mibi06g2351 770 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
Mibi06g2351 770 ProSiteProfiles Protein kinase domain profile. 368 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2351 Mibi-ChrMibi06 43793677 43799449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2351 119 756 Receptor kinase-like Gene Family AT5G56890 53.464 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mibi06g2351 PK_Tyr_Ser-Thr 3.3e-48 CL0016