Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2338 ATGGAAGGAGCTAGTTCTTGGGGTTCGTCAAGAAGGGAGTTAAGGGCACTGGTAGTGGACGACCAAGAAATAATGAGGAAGATACATGGGAGAATGCTGAACAATCTTGGAGTGACAATAAATGTGGAGGCTGCCCAAAATGGGAAAGAAGCCATTGACATTCACAAGGCAGGTCGAAGTTTTGACCTCATTATCATGGACTTGGACATGCCCCTTATGAATGGCATTCAGGCAACAAGGGGACTTAGAGAAATGGGGGTTAAAAGCAAGATCGCAGGTGTATCAGCAAGAGAGGAAGAAGGTAGAGTAAAAGAATTCATGGAAGCAGGACTTGATCTATTTTTTCATAAACCCTTAACATCTCTTGAACTTTCTTCACTTGTTGCACAAATCAACACTCTTTAG 405 0.4272 MEGASSWGSSRRELRALVVDDQEIMRKIHGRMLNNLGVTINVEAAQNGKEAIDIHKAGRSFDLIIMDLDMPLMNGIQATRGLREMGVKSKIAGVSAREEEGRVKEFMEAGLDLFFHKPLTSLELSSLVAQINTL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2338 134 SUPERFAMILY CheY-like 13 131 IPR011006 -
Mibi06g2338 134 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 131 - -
Mibi06g2338 134 ProSiteProfiles Response regulatory domain profile. 15 132 IPR001789 GO:0000160
Mibi06g2338 134 Pfam Response regulator receiver domain 17 126 IPR001789 GO:0000160
Mibi06g2338 134 Gene3D - 4 133 - -
Mibi06g2338 134 SMART REC_2 14 128 IPR001789 GO:0000160
Mibi06g2338 134 CDD REC_hyHK_CKI1_RcsC-like 17 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2338 Mibi-ChrMibi06 43621528 43622343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2338 2 131 Response Regulator Gene Family AT3G04280 39.098 4.81e-24 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi06g2338 Response_reg 2.4e-22 CL0304