Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2317 ATGGAGACTCAGAGAATTATCGAATTCCCGCATCAGAACATGGATAAGCGCCCCGGGAAGAGACCTCGTTTAACATGGGATATGCCCCCTGCTATTCCTCCAGCTTCCAAGGCTCTTCCGGCTTTATATTGCAGCCAGGAACTAGCGAATGGAGTGGTTCCGAATCATGTATATTCTTCTGTTATCTACAGGGGAATGCCTCGCCATGGATCGCCCCCTTATAGGTCTGATGATAAAGATGGGCACTATGTTTTTGCTATTGGTGAAAATCTAACCTCACGATACAGAATTCTCAGTAAAATGGGCGAAGGGACATTTGGCCAAGTCTTGGAATGTTTTGACAATGAAAAGGAAGAAGTTGTTGCAGTCAAAGTTATTCGCTCAATACACAAGTATCGTGAGGCTGCAATGATTGAAATTGATGTCCTGCAGAGGCTTGCCAGGCATGACATTGGCAGTGCACGTTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATGTTTGTATTGTGTTTGAGAAGCTTGGGCCAAGCTTATACGATTTTCTCCGCAAAAACAGCTATCGTTCTTTTCCCATTGATCTTGTTCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTAGCATTTATGCACGAATTACGATTGATTCACACTGATTTGAAGCCAGAGAATATTCTTCTTGTCTCATCAGATTATATTAAAGTGCCAGACTACAAGTTTCTAGCTCGAACTACAAATGATGGCTCCTATTTCAAAAACCTACCTAAGTCAAGTACCATAAAACTCATCGATTTTGGGAGTACAACATTTGAACATCAGGATCACAGCTATGTGGTGTCAACCAGACACTATCGAGCACCAGAGGTTATCTTAGGTCTTGGGTGGAATTATCCCTGCGATCTCTGGAGTGTTGGTTGTATACTGGTTGAACTCTGCTCTGGTGAAGCCCTTTTTCAAACTCATGAGAACTTGGAGCATCTTGCTATGATGGAGAAAGTTTTGGGGCCACTACCCCCACAAATGGTGGTCAGGGCCGACCGTCGAGCTGAGAAGTATTTTAGAAGGGGTGCACGGCTGGGTTGGCCAGATAGTTCAACCTCAAGAGAAAGCTTGAGGGCTGTTTGGAAATTGCCTCGCTTGCCGAACCTTATAATGCAGCACGTTGATCATTCTGCTGGTGATTTGATTGATCTTCTGCAAGGACTCCTTCGATATGATCCTGCTGAACGATTAAAAGCAAGGGAAGCATTAAGACATCCCTTCTTTACTAGAGATCTTAAACGTCGCTATCCTCTGTAA 1302 0.4393 METQRIIEFPHQNMDKRPGKRPRLTWDMPPAIPPASKALPALYCSQELANGVVPNHVYSSVIYRGMPRHGSPPYRSDDKDGHYVFAIGENLTSRYRILSKMGEGTFGQVLECFDNEKEEVVAVKVIRSIHKYREAAMIEIDVLQRLARHDIGSARCVQIRNWFDYRNHVCIVFEKLGPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHELRLIHTDLKPENILLVSSDYIKVPDYKFLARTTNDGSYFKNLPKSSTIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMEKVLGPLPPQMVVRADRRAEKYFRRGARLGWPDSSTSRESLRAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDLKRRYPL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2317 433 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 426 - -
Mibi06g2317 433 SUPERFAMILY Protein kinase-like (PK-like) 82 429 IPR011009 -
Mibi06g2317 433 Gene3D Phosphorylase Kinase; domain 1 82 175 - -
Mibi06g2317 433 MobiDBLite consensus disorder prediction 1 23 - -
Mibi06g2317 433 Gene3D Transferase(Phosphotransferase) domain 1 149 423 - -
Mibi06g2317 433 MobiDBLite consensus disorder prediction 9 23 - -
Mibi06g2317 433 FunFam Serine/threonine-protein kinase AFC2 171 423 - -
Mibi06g2317 433 SMART serkin_6 95 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2317 433 Pfam Protein kinase domain 95 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2317 433 FunFam Serine/threonine-protein kinase AFC2 82 175 - -
Mibi06g2317 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Mibi06g2317 433 CDD PKc_CLK 82 423 - -
Mibi06g2317 433 ProSiteProfiles Protein kinase domain profile. 95 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2317 Mibi-ChrMibi06 43450454 43454075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2317 95 423 Core Cell Cycle Gene Families AT1G76540 27.193 1.23e-31 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Mibi06g2317 Pkinase 2.5e-49 CL0016