Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2287 ATGTTTCGGTTTCAAGCTGTCTTCGTTGGTGATCCAGTGAGGCACCGTGCTTCACACACCGATGGGGTTTCTCCGGTCGAAGAGGAAGGAAGCATGGGTTGGATTCCATGTTCTGGAAATCCGAACGGTAAGAAAAAGAGTAAGAATAAGATAAAGAAGACGGAGGTGCAGGAGAATACGGTAGATCAAACCAAAACAACTCCAGGGAAGTTGAAGAGGAACTCATCCACTAGTTCTGTAGATCCCTCTAAAAATGGGAATTCTGATCACATTGCGGCTCAGACTTTCACATTTCGTGAGTTGGCAGTTGCAACCAGAAATTTTAGGACAGAAAGTCTTTTGGGAGAGGGAGGATTTGGTAGGGTATACAAGGGCCGTTTAGAAAGTTCTAATCAGATTGTCGCAATAAAGCAACTTGACCGAGATGGGCTGCAAGGGAATAGAGAATTCCTTGTTGAAGTTTTGATGTTAAGTCTACTTCACCACCCTAACCTTGTCAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATACATGCCATTAGGATCCTTGGAGGACCACTTATATGATATCTCACCTGCCAAGAAATGGCTTGACTGGAACACACGAATGAAAATTGCTGCCGGGGCAGCAAAGGGATTGGAATATCTGCATGACAAAGCGAACCCTCCTGTCATATACCGAGATTTAAAGTGTTCAAACATCCTGCTTGGGGAAGGGTATCATCCAAAGTTATCTGATTTTGGTTTGGCTAAACTTGGACCTGTTGGGGAAAACACCCATGTATCCACAAGGGTTATGGGTACCTATGGATATTGTGCTCCAGAGTATGCAATGACAGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGCATAGTTCTTCTGGAAATAATTACAGGAAGGAAAGCCATTGACAGTTCAAAAGCTGCGGGAGAGCAGAATCTTGTTGCATGGGCTAGACCTTTGTTTAAAGATCGAAGAAAATTTTCACAAATGGCTGATCCAATGCTTCAAGGTCAGTACCCTCCCAGAGGCTTATATCAAGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAGCAAGCAAATATGAGGCCAGTTATAGCTGATGTCGTCACTGCCTTGTCTTACCTTGCTTCCCAAAGGTTTGACAGCAATTCACACTCTCTTCAAAGCCCTCACCTTGCCCCTGCTACTCCTACAACAAGAAGAGGAAGATGA 1242 0.4396 MFRFQAVFVGDPVRHRASHTDGVSPVEEEGSMGWIPCSGNPNGKKKSKNKIKKTEVQENTVDQTKTTPGKLKRNSSTSSVDPSKNGNSDHIAAQTFTFRELAVATRNFRTESLLGEGGFGRVYKGRLESSNQIVAIKQLDRDGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLYDISPAKKWLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGIVLLEIITGRKAIDSSKAAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRFDSNSHSLQSPHLAPATPTTRRGR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2287 413 Pfam Protein kinase domain 109 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2287 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Mibi06g2287 413 PANTHER OS07G0668900 PROTEIN 53 394 - -
Mibi06g2287 413 MobiDBLite consensus disorder prediction 15 89 - -
Mibi06g2287 413 MobiDBLite consensus disorder prediction 60 89 - -
Mibi06g2287 413 FunFam Serine/threonine-protein kinase PBS1 81 184 - -
Mibi06g2287 413 ProSiteProfiles Protein kinase domain profile. 108 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2287 413 FunFam Serine/threonine-protein kinase PBS1 185 400 - -
Mibi06g2287 413 SUPERFAMILY Protein kinase-like (PK-like) 90 382 IPR011009 -
Mibi06g2287 413 CDD STKc_IRAK 114 382 - -
Mibi06g2287 413 Gene3D Transferase(Phosphotransferase) domain 1 185 401 - -
Mibi06g2287 413 SMART serkin_6 108 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2287 413 Gene3D Phosphorylase Kinase; domain 1 79 184 - -
Mibi06g2287 413 MobiDBLite consensus disorder prediction 393 413 - -
Mibi06g2287 413 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2287 Mibi-ChrMibi06 43191416 43194470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2287 62 401 Glycoside Hydrolase AT3G07070 64.412 1.46e-162 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mibi06g2287 Pkinase 1e-45 CL0016