Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2285 ATGACAAGGGACGTCCTGATGAGCATTGATGGTGATGAGAAAGAATTTCAAGAATTAGCTCAGCGTCTACGAGATGGTAAAAAAACCACCAAAGAGGGACTTGTCGGTGATGAACATAGTTGCCGTGAGGATGATGAGTTAAAAAGTAATGGAACAGCTGAAGAAGTCAAAGTGGGACAAGATGGGAATGTGGAAGCCCCAGCCGTTCAGCATATTCCACAACAACAGCCTCAGGGGGCTATTTGGGAGAGATTCCTACATCTCAGATCCCTCAAGGTCTTGCTTGTGGAGATTGATGACTCTACTCGTCATGTTGTCGCGGCACTGCTTCGCAATTGTAGTTATGAAGTGATTGAAGCAGCAAACGCATTGCATGCATGGAAGATCTTGGAGGATTTAACCAATCAAATAGATCTTGTCTTGACTGAGGTAGCAATGCCTTGCTTATCAGGGATTGGCCTTCTCTCCAAAATTATGGCCCACAAAACACGGAAAAACGTTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCCGTTGACTTTCTAGTGAAACCTATACGGAAGAATGAGCTTAAAAACCTATGGCAGCATGTGTGGAGAAGATGTCATAGTTCAAGTGGTAGTGGAAGTGAAAGTGGCACACAAACTCAGAAATCCATTAAATCAAAGAGTCTTGAGAAGTCTGATAACAACAGTGGCAGCAATGATGAAGAAGACCATGGTAGTGTGGGTCTTAATAACGGGGATGGAAGTGATAATGGTAGTGGTACTCAGAGCTCATGGACTAAACAAGCTGTAGAAGTTGACAGTCCCAAACCATCCCAGTGGGATCATATAGCTGAGTGCCCTGATAGCACCTGTGCTCAAGTTGTTATCTCAAATGCTGAAATTAGTGGAAACAAGATGTTTTCTGTAGCCATAAAGGAGTGTCCAGATCAGAAGGATCAGCTTGAGCTGAAAGTGGATTCGAGTAGGGATCTTGGCTTGATTCTCGACTATAGAAATGAAGTTTTAACCAATAATTTGGGCGAAAAGCATGGCAACCCACTTGATATAGGCTCCTCTAAATTCAATGATCAACTTAATAGAGGACATCTGGAACTTCACTGTGAAGATCTCTCCAGCAAGTCAAGATGCAGAGGTCCATTTCAGTCGGATGCTGTTACTAGTAGTACATATGATTTGCGGATTCATGGTGGAGAATTTGAAGCCTCAAATAGAAGAGCCAAGCCCTCGGATATTGAAAGCAAAGCTATTAATGATAATGAAGAATTGCCGTCTCTTGAGCTCAGTTTAAAGAGACTTAGAGGAGTTAAAGATGCTGGGATCACAATTCAGGATGAGCGTAATGTTTTAAGACGTTCTGACCTTTCAGCCTTTTCAAGGTACAATGCGGCTTCTAATGCTAAGAAATCTCCTGGTGGTTGTGCGGGAAGCAATTCTCCCCATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCACGTGACATCCAATCCCATTCTAGCGGAAATCCCCCTAACCAGAACTCAAATGGTGCCAGCAATAACATTGACATGGGCTCCACGACCGATAATGCTTTCACTAAATCTGCTGTTATGAGCAAGATAACAGTGGCGTCACCAAGTAAATGTTTGTATCATTCTTCTGCCTTCCAGCCTATAAAAAACAACTTTATGCGTACCTCTCAACAAGTGGCAGTACATAATGCTGAAGATATGACGGCCTCAACTATGCTAGAACCACCTAGAGGAGGTGCACACAAGGACTCTATAACGCAGGACTTCCACGGCATATACAACAACCATAGCTGCGTCGTCAACAACATGCAGCATCAGCTACCTCCAGACCATGATGATGCATCATCAAAGAAAATTGCTGCCACAGCTCCACACTGTGGGTCATCAAATGTAGTTGAAATGGTTGAAGGTAATGTTGGAAATTATAGTATCAATAGAAGCGTGTCGGGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCATTGCAGTCAATGCTGGAGGGATGAACACAGAAAATAACAATGGAATTGCTGGGAATAGTCGAGGTGGTGATGCTAGTGGGAGTGGGAGTGGGAGTGCTAACAGAATAGATCAGAAGAAGACCTCTCAAAGAGAAGCAGCCTTAACTAAATTTCGCCAGAAGAGACAAGAGAGGTGCTTCCGGAAAAAGGTTCGATATCAGAGCAGAAAGAAATTAGCTGAACAACGACCTCGCTTTCGTGGGCAATTTGTTCGACAGGCCTCCAACAAAAGTACCAGTGAGGCAGATGAGGGAACTGACAGCTGA 2346 0.4335 MTRDVLMSIDGDEKEFQELAQRLRDGKKTTKEGLVGDEHSCREDDELKSNGTAEEVKVGQDGNVEAPAVQHIPQQQPQGAIWERFLHLRSLKVLLVEIDDSTRHVVAALLRNCSYEVIEAANALHAWKILEDLTNQIDLVLTEVAMPCLSGIGLLSKIMAHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKSLEKSDNNSGSNDEEDHGSVGLNNGDGSDNGSGTQSSWTKQAVEVDSPKPSQWDHIAECPDSTCAQVVISNAEISGNKMFSVAIKECPDQKDQLELKVDSSRDLGLILDYRNEVLTNNLGEKHGNPLDIGSSKFNDQLNRGHLELHCEDLSSKSRCRGPFQSDAVTSSTYDLRIHGGEFEASNRRAKPSDIESKAINDNEELPSLELSLKRLRGVKDAGITIQDERNVLRRSDLSAFSRYNAASNAKKSPGGCAGSNSPHNNSLEVTKKDSSRDIQSHSSGNPPNQNSNGASNNIDMGSTTDNAFTKSAVMSKITVASPSKCLYHSSAFQPIKNNFMRTSQQVAVHNAEDMTASTMLEPPRGGAHKDSITQDFHGIYNNHSCVVNNMQHQLPPDHDDASSKKIAATAPHCGSSNVVEMVEGNVGNYSINRSVSGSNNGSNGQNGSSIAVNAGGMNTENNNGIAGNSRGGDASGSGSGSANRIDQKKTSQREAALTKFRQKRQERCFRKKVRYQSRKKLAEQRPRFRGQFVRQASNKSTSEADEGTDS 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2285 781 MobiDBLite consensus disorder prediction 233 247 - -
Mibi06g2285 781 SUPERFAMILY CheY-like 89 215 IPR011006 -
Mibi06g2285 781 MobiDBLite consensus disorder prediction 667 717 - -
Mibi06g2285 781 MobiDBLite consensus disorder prediction 667 781 - -
Mibi06g2285 781 Pfam CCT motif 724 766 IPR010402 GO:0005515
Mibi06g2285 781 Pfam Response regulator receiver domain 93 204 IPR001789 GO:0000160
Mibi06g2285 781 MobiDBLite consensus disorder prediction 27 47 - -
Mibi06g2285 781 MobiDBLite consensus disorder prediction 510 534 - -
Mibi06g2285 781 SMART REC_2 91 206 IPR001789 GO:0000160
Mibi06g2285 781 CDD psREC_PRR 93 196 - -
Mibi06g2285 781 MobiDBLite consensus disorder prediction 479 499 - -
Mibi06g2285 781 FunFam Two-component response regulator-like PRR37 91 249 - -
Mibi06g2285 781 Gene3D - 90 247 - -
Mibi06g2285 781 MobiDBLite consensus disorder prediction 215 288 - -
Mibi06g2285 781 MobiDBLite consensus disorder prediction 248 280 - -
Mibi06g2285 781 MobiDBLite consensus disorder prediction 718 734 - -
Mibi06g2285 781 ProSiteProfiles CCT domain profile. 724 766 IPR010402 GO:0005515
Mibi06g2285 781 PANTHER TWO-COMPONENT RESPONSE REGULATOR 91 283 IPR045279 GO:0009736
Mibi06g2285 781 MobiDBLite consensus disorder prediction 479 534 - -
Mibi06g2285 781 MobiDBLite consensus disorder prediction 735 749 - -
Mibi06g2285 781 MobiDBLite consensus disorder prediction 215 232 - -
Mibi06g2285 781 ProSiteProfiles Response regulatory domain profile. 92 210 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2285 Mibi-ChrMibi06 43175643 43183771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2285 167 768 Response Regulator Gene Family AT5G02810 47.833 7.55e-121 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mibi06g2285 Response_reg 1.5e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2285 06 43175643 43183771 Mibi06g2285 06 43175643 43183771 ECH