Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2278 ATGTACGGAGCTCCGATAGAGAAGCACATGGTCGGATATGGCTCCTTGGATCCAAGTGGTATCATGGATGTATTAGCCATTTATTTTCCTCAGCAACTTTTCACTGTCGAACAAGCCTGGCTCGACCTCACCTCCGCTCTCTTCTCTTTCTTTTCTTCTCCCTCGGCCCAAAACCTAACTTCCCAGGTAAAAAATCATCGTGGCAGCTTGGCCTTATCACTTGACTTCCAGCAGTTTCAAAAAGTATGTCATATTGAGGAATTTTATAAAATGTTAGAGGAGAAACCTAAAATCGCTCTCTTGTGCATGAGCGCTGCAGTTCATAAGGTTCTTATTGCCATATGGGAGAGTGACCAACTTGAGGATGGTGCAAAAGTTGACATCCGACTATATAACTGTCCTGAAACTATGATTGCTCTGAAAAACTTAAAAGCAGCATATATTGACAAACTTGCCTCAGTGCGTGGCACGGTTGTGAAGGCCAGCACTGTCAGGCCTCTTGTGGTAGAAATGAGTTTTGAATGCGGAAAGTGCAAAGAAAGAATTAGGCGTATATTTCCTGATGGAAAATTTTCACCACCATCAATTTGCAATTTGAATGGCTGCAAGAGCAAAATATTTAACCCATTACGATCTACAGCTGAAGCTATAGATTTTCAAAAAATAAGGCTGCAAGAACTCCTAAAACCCGAAGACCATGAAGAAGGACGAGTTCCTCGGACAGTGGAATGTGAGCTTACCCAAGATCTTGTTGATACATGCATACCTGGAGATGTGTTGACTGTTACTGGAATTATAAGAGGAATAAACAATTACATGGATATTGGAGGAGGAAAGTCAAAGGGCAGAAGCCAGGGATTTTACTATCTGTATCTAGAAGCTGTTTCCATACAAAATTCCAAGTCACAGTCTACAAATGAGGATTTGCAAGACTCTAATACCAAAGCAAGACCAGCTGAGCTGCTTGATTTGTTTTCATTTTCTTCCAGAGATTTAGAGTTTATTGTGAAATTTTCAATGGAGCATGGCTCAGATTTGTTTCGGCAAATACTTCAATCTATATGCCCATCTATCTATGGGCATGAACTTGTCAAAGCTGGGATTACGCTGGCACTATTTGGGGGTGTACGAAAACATTCTATGGATCAGAATAAAGTTCCTGTAAGGGGAGACATTCATGTCATAATCGTCGGTGATCCTGGACTAGGCAAGAGCCAATTGCTACAAGCAGCAGCCGCTGTTTCTCCACGGGGCATCTATGTCTGCGGTAATGCGACAACTAAAGCTGGCCTCACAGTAGCTGTAGTAAAGGATCCTATGACGAGTGATTATGCTTTTGAGGCCGGTGCTATGGTGCTGGCTGACAGTGGATTGTGTTGTATTGACGAGTTTGATAAAATGTCAGCCGAACATCAGGCTCTGCTAGAGGCCATGGAACAACAGTGTGTCTCTGTTGCAAAGGCAGGATTGGTAGCAAGTTTATCAGCTCGAACTTCTGTCCTAGCGGCTGCAAATCCAGCCGGTGGTCATTATAACCGTGCGAAGACTGTGAATGAAAACTTAAAAATGAGTGCCGCTCTGCTGTCCCGGTTTGATTTAGTTTTCATACTGCTGGACAAACCTGATGAACTTCTGGACAAGCGAGTCTCGGAGCACATCATGTCACTTCATGCTGGAAATGGACAACTTGCAGTCAAAAAGCAACATTTACCTTCTGATTCAAGAATTACGGTACCACAGAATGCTGAAAGCATAGATTTGGGGGTTAGGCCCGGTTCTTTAGTGTCAAAGGTGAGACTTGACCCACAAAGAGATAGTGATTTTGTTCCGTTGCCTACTCAACTTCTTCGAAAATACATTGCCTATGCGAGGAATTTTGTCTTTCCTAGGATGTCCAAGCCCGCGGCAGAAATCCTACAAAAGTTTTACCTTAAGCTGAGAGATCATAATACTTCAGCTGATGGCACACCGATAACAGCGAGGCAACTTGAAAGTCTAGTGAGGCTGGCTGAAGCTCGAGCTCGGCTAGACTTGAGAGAAGAAATAACGGCCCAGGATGCCATGGATGTAGTTGAAATAATGAAGGAATCCCTGTATGATAAATACGTAGATGAGCATGGATTTGTGGATTTTGGACGAAGTGGGGGGATGAGTCAACAGAAAGAGGCGAAACGCTTCCTGAGTGCCCTCAATAAACAATCAGAATTACAGCAGAAAGATTGCTTTTCAATATCTGAAATATATAGTCTGGCGGATAGAATTGGCCTACAAGTGCCTGATATTGACTCTTTCATCGATAATTTAAACAGCGTTGGTTATCTACTCAAAAAGGGACCAAAGACATACCAGGTGTTATCTTCCTCATATACCCGAAGCCAATCATCGAGGAGTGTCATACTTATCTATACTAATGTTCCATAA 2421 0.4283 MYGAPIEKHMVGYGSLDPSGIMDVLAIYFPQQLFTVEQAWLDLTSALFSFFSSPSAQNLTSQVKNHRGSLALSLDFQQFQKVCHIEEFYKMLEEKPKIALLCMSAAVHKVLIAIWESDQLEDGAKVDIRLYNCPETMIALKNLKAAYIDKLASVRGTVVKASTVRPLVVEMSFECGKCKERIRRIFPDGKFSPPSICNLNGCKSKIFNPLRSTAEAIDFQKIRLQELLKPEDHEEGRVPRTVECELTQDLVDTCIPGDVLTVTGIIRGINNYMDIGGGKSKGRSQGFYYLYLEAVSIQNSKSQSTNEDLQDSNTKARPAELLDLFSFSSRDLEFIVKFSMEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVKDPMTSDYAFEAGAMVLADSGLCCIDEFDKMSAEHQALLEAMEQQCVSVAKAGLVASLSARTSVLAAANPAGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDELLDKRVSEHIMSLHAGNGQLAVKKQHLPSDSRITVPQNAESIDLGVRPGSLVSKVRLDPQRDSDFVPLPTQLLRKYIAYARNFVFPRMSKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLDLREEITAQDAMDVVEIMKESLYDKYVDEHGFVDFGRSGGMSQQKEAKRFLSALNKQSELQQKDCFSISEIYSLADRIGLQVPDIDSFIDNLNSVGYLLKKGPKTYQVLSSSYTRSQSSRSVILIYTNVP 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2278 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 704 IPR027417 -
Mibi06g2278 806 Gene3D - 324 707 IPR027417 -
Mibi06g2278 806 Pfam MCM AAA-lid domain 615 698 IPR041562 -
Mibi06g2278 806 SMART mcm 136 699 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mibi06g2278 806 CDD MCM8 350 697 - -
Mibi06g2278 806 Pfam MCM P-loop domain 340 557 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi06g2278 806 Coils Coil 461 481 - -
Mibi06g2278 806 FunFam DNA helicase MCM8 isoform X1 167 218 - -
Mibi06g2278 806 Pfam MCM OB domain 140 268 IPR033762 -
Mibi06g2278 806 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 58 735 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mibi06g2278 806 SUPERFAMILY Nucleic acid-binding proteins 68 270 IPR012340 -
Mibi06g2278 806 PRINTS Mini-chromosome maintenance (MCM) protein family signature 476 489 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi06g2278 806 PRINTS Mini-chromosome maintenance (MCM) protein family signature 527 535 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi06g2278 806 PRINTS Mini-chromosome maintenance (MCM) protein family signature 389 404 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi06g2278 806 PRINTS Mini-chromosome maintenance (MCM) protein family signature 449 463 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi06g2278 806 PRINTS Mini-chromosome maintenance (MCM) protein family signature 500 512 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi06g2278 806 SMART AAA_5 390 542 IPR003593 -
Mibi06g2278 806 Gene3D - 140 269 IPR012340 -
Mibi06g2278 806 ProSiteProfiles MCM family domain profile. 346 553 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi06g2278 806 Gene3D - 167 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2278 Mibi-ChrMibi06 43125971 43132174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2278 16 785 Core DNA Replication Machinery Family AT3G09660 72.057 0.0 1153