Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2261 ATGATCGGCGTAGCCTTATGGCATAGAAGCATCCACGTCTATCTCCATGAAGTTTCGTATCTCATTGGTAGCTAGAATTTCTCATCCTCTTGTTTCTCAACTTCTCTCCCTCTTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGCCTTCTGCTATAATCTCTGCGCGTTCGAGATTGTTACTTCACCAGCATCGGACTCTCACCGATTCACAAGGCACTTTTATCTGGTTTCTTGTTGCTGATGCTATATGTTTGCATCTTGATTTTGAACTCAAGATTCTAACATTATATATCTGCACGTGCTGGCATTTGCATTGTGCTGCTGTTGTGGCACTGTGTTATAAGATAACTTCATATAAGAAGAAGAAAGTGTATCCATACCAAAGATCCTCATTCCTCTGCCAATTGGAAGAGTGTAGTCCTCTTTCAACTGGGATTTGGCATTCAGATGTAGTTCATCCATCTTCTAGGCGTGGACTTATCTGCCCTGTGGCATGTTGTCAGTTATTTGCAGATCTATCTTTAACTACGGTGTCTATCCAGACTTTGCAAGTGACAGCCATGAGTCATAGGCATTTGCATAGCAGTCAAATATTTGAGAGTGACCAGGACCAAAATTGGAATTCTATGCATCCTGATCAACAGTATGCGCCCCTTGGTAGAGCTAGCACTCCAGAGAATGGTTCTTTTGTTTGTCCAATGGAAAATATGTCTATAGATGGCATTTCTTTTGCCTCTAACTGGAATTCTGCCACAATGCCAAATGGATTTGCATCCTCAAGTCTCAATATTGAAGTACCACCTCACCAATCTGATGCATCAGGCGCTTCTCATGATCATTTTCTGCATTCATCAAGTGCTGCGGCCTTCTTTTCCATTTCTGAAAATTATACTCATCAGCCTCCTCTTCCTCCTCCTCCCAATTATGATAGTCAGGCATTTCACGTTGTTGATGGTGGTTGTATCGATCTTACAATGGGAAATGGAAGAGGGCCTCACAAGCGGAAGAGCCCTGGAATTCCTCCTGTATGTGAGAGAGGTAGTACGAGCAGATACATAAATGCTGGAAGTTCAACTGAACTTCCAATGTCTTCAGAACTACGGCAGGAGAAGCCCAATATGGATTCTCGATATTTGCCTCGGGATCAAGTTACCATGCCACTCACCTTCAGAGGTAGTGGTCTTTCAATCAGAGGTGAGGGTTCCTTGAGAAATGTGAGAAGCCGTTCGGCATTTGATTTTGAATCCAATCTGGCTAGGACTTATTTATCTGGCAATCATTCACACAACTACTCCCCTGGTCTACCCATTGACCATTCTAGTACAATGGATCTCTCTGGTCAGAATTCTAGCGGATCAACAAGGGATTGGAACCAAATGAGCACATCTCATGCTCATGGCAGGGTGCTATTACCAGATACAAGTGCTCTTAATTGTGAGAGAAGTCATTTCCTTGTTGGAAGTGGCACTAGTAATGCTTCCGTAGATGTTGGGAGTTACCACCATGAATTTGGTACGGGCAGAAATCCTATTGTACCTCAAAGTTCTCATAATAATCTTACTCAGACTGCTAGGGGAGTGCGGAGCAACTTTTCACAAAGGTCTACACCTTTAAGATATCCTTCGAGATTGCGCTTGGGATATGTAGCACCATCAGATGATGGATTGCAAATGGTTGCTGATAATTACCCCTTGAGACATCCGAGGCCATTAACAAGTTTACCAACCATTGGCTGGCGGAACGGTGACAGGAATGGAAGGTCAAGGATATCTAGTGATAGATATCGACCATTGGCTGATGCATCTGGTCTCCAGGATCGATTTTCTTCAGAGGGTTTCATGATTGTCGATCGTGGGTTGCCATATGGATCTAGAAGTATGGCTGATCAGCACAGGGACATGAGGATGGACATAGACAACATGAGCTATGAGGAACTACTTGCCCTTGGAGAGAGGATTGGTCATGTCAGCACAGGATTGTCTGAGGATTTGATATCAAAATGCATGACAGCAACAATATATTGTTCTTCTGAGCAAATTCAGGAGGAAGGAAATTGTGTGATCTGTTTGGAAGAATACAAGGACATGGATGATGTTGGGACGCTGAAAACTTGCCGTCACGACTACCATGTGAGCTGCATTAGAAAGTGGTTATCTATGAAGAACAAATGTCCAATCTGCAAAGTTTCTGCCCTGCCAGATGATGTGAAGGATAAATGA 2232 0.4341 MIGVALWHRSIHVYLHEVSYLIGSXNFSSSCFSTSLPLHLSLSLSLSLSLCVPSAIISARSRLLLHQHRTLTDSQGTFIWFLVADAICLHLDFELKILTLYICTCWHLHCAAVVALCYKITSYKKKKVYPYQRSSFLCQLEECSPLSTGIWHSDVVHPSSRRGLICPVACCQLFADLSLTTVSIQTLQVTAMSHRHLHSSQIFESDQDQNWNSMHPDQQYAPLGRASTPENGSFVCPMENMSIDGISFASNWNSATMPNGFASSSLNIEVPPHQSDASGASHDHFLHSSSAAAFFSISENYTHQPPLPPPPNYDSQAFHVVDGGCIDLTMGNGRGPHKRKSPGIPPVCERGSTSRYINAGSSTELPMSSELRQEKPNMDSRYLPRDQVTMPLTFRGSGLSIRGEGSLRNVRSRSAFDFESNLARTYLSGNHSHNYSPGLPIDHSSTMDLSGQNSSGSTRDWNQMSTSHAHGRVLLPDTSALNCERSHFLVGSGTSNASVDVGSYHHEFGTGRNPIVPQSSHNNLTQTARGVRSNFSQRSTPLRYPSRLRLGYVAPSDDGLQMVADNYPLRHPRPLTSLPTIGWRNGDRNGRSRISSDRYRPLADASGLQDRFSSEGFMIVDRGLPYGSRSMADQHRDMRMDIDNMSYEELLALGERIGHVSTGLSEDLISKCMTATIYCSSEQIQEEGNCVICLEEYKDMDDVGTLKTCRHDYHVSCIRKWLSMKNKCPICKVSALPDDVKDK 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2261 743 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 655 736 - -
Mibi06g2261 743 MobiDBLite consensus disorder prediction 432 463 - -
Mibi06g2261 743 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 655 736 IPR013083 -
Mibi06g2261 743 SMART ring_2 690 731 IPR001841 -
Mibi06g2261 743 ProSiteProfiles Zinc finger RING-type profile. 690 732 IPR001841 -
Mibi06g2261 743 MobiDBLite consensus disorder prediction 331 354 - -
Mibi06g2261 743 SUPERFAMILY RING/U-box 679 736 - -
Mibi06g2261 743 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 334 736 IPR045191 GO:0061630
Mibi06g2261 743 Pfam Ring finger domain 689 732 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2261 Mibi-ChrMibi06 43001227 43010413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2261 192 742 C3H Transcription Factor Family AT2G37150 41.519 4.87e-104 328