Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2255 ATGCTTAATTTTCTGGGTTTATCATCCCCAATGGATGCGGTAGGGTGGAGAGGGTTGCTCTACGCAATATCCATTCTCAATTTTGTTTTGGTCTGCCAGCTTGTTCTCCTTCAACCTCTCGTCTCCTCTCTAGAGGGAGAACCCGGAAATGCTGCTGAGTTATTTGAAAGGGCGTCTCAAAGTATAAAAGTGAAACATTATACTGAGGCGCTTGATGATTTGAATGCTGCCATTGAAGCAGATTCAACCCTTTCAGAAGCATACCTTCGCCGTGCATCACTTCTTCGGCAGATATGCAGATACAAGGAATCTGAGGAGAGCTATAGAAAATTTTTGGAGTTGAAACCTGGAAATTCAGCGTCAGAAAAGGAGCTCTCTCAGTTGTTGCAGGCCCAAAGTGCTCTAGAAACGGCTCAGTCATTCTTTGATTCTGGAAACTTTTCAAAATCTTTGGAATACATCAATAAAATTGTACTTGTTTTTTCTCCTGAATGCTCAAAGGCTAAACTTCTAAAAGTAAAGCTGTTAATAGCTGATAAATACTATGAAGAGGCCATTGCGGAATCTGGATTCATTCTTAAGGAAGATGATAATAATTTAGAGGCTTTATTGCTCCGAGGGCGTGCATACTATTATTTGGCTGATCATGACGTTGCCATGAGGCATTACCAGAAAGGTCTCCGTCTAGACCCTGAGCACAGTGAATTGAAAAAAGCATATTTTGGATTGAAAAATCTACTGAAAAAGAGTAAAAGTGCTGAGGATAATGTCAGTAAGGGTAAACTGCGTGTAGCTGTTGAGGAATTCAAAGCAGCGCTGGCGGTTGATCCTAATCATCTTGCACATAATGTACATCTTCATCTTGGCTTATGTAAAGTGTTGGTTCAACTCGGTAGGGGAAAAGATGCTCTGAACAGTTGTGATGAAGTTCTTAAGATCGATGAGGAACTCCTTGATGCTCTTGTTCAGAGGGGAGAAGCTAAACTTTTAACAGAGGATTGGGAGGGAGCTGTGCAAGATCTGAAATCAGCCGCTCAAAAATCTCCTCAGGATATGAATATTCGTGAAGCTTTGACGAGGGCTGAAAAAGCTTTGAAGATTAGCAAGCGCAAAGATTACTACAAAATTCTGGGAATTTCAAAAACGTCGTCTATGTCTGAGATAAAACGTGCCTATAAGAAACTTGCTTTGCAATGGCACCCAGATAAGAACGTAGACAACAGGGAAGAAGCAGAGGCAAAATTCAGAGAAATTGCTGCTGCTTATGAGGTTCTGAGTGATGAAGATAAACGAACCAGATATGACAGAGGGGAAGACCTTGAAGACATGGGAATGGGTGGTGGAGGCGGAGGATTTAACCCCTTTGGTGGCGGGGGCCAAACGTTTACATATACTTTTGAGGGAGGCTTCCCTGGTGGTGGCTTTGGCGGAGGGTTTCCTGGTGGGTTTGGCGGCGGTGGCGGCTTTGAGTTTCATTTTTGA 1482 0.4285 MLNFLGLSSPMDAVGWRGLLYAISILNFVLVCQLVLLQPLVSSLEGEPGNAAELFERASQSIKVKHYTEALDDLNAAIEADSTLSEAYLRRASLLRQICRYKESEESYRKFLELKPGNSASEKELSQLLQAQSALETAQSFFDSGNFSKSLEYINKIVLVFSPECSKAKLLKVKLLIADKYYEEAIAESGFILKEDDNNLEALLLRGRAYYYLADHDVAMRHYQKGLRLDPEHSELKKAYFGLKNLLKKSKSAEDNVSKGKLRVAVEEFKAALAVDPNHLAHNVHLHLGLCKVLVQLGRGKDALNSCDEVLKIDEELLDALVQRGEAKLLTEDWEGAVQDLKSAAQKSPQDMNIREALTRAEKALKISKRKDYYKILGISKTSSMSEIKRAYKKLALQWHPDKNVDNREEAEAKFREIAAAYEVLSDEDKRTRYDRGEDLEDMGMGGGGGGFNPFGGGGQTFTYTFEGGFPGGGFGGGFPGGFGGGGGFEFHF 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2255 493 SMART dnaj_3 371 430 IPR001623 -
Mibi06g2255 493 ProSitePatterns Nt-dnaJ domain signature. 415 434 IPR018253 -
Mibi06g2255 493 ProSiteProfiles TPR repeat profile. 85 118 IPR019734 GO:0005515
Mibi06g2255 493 Pfam DnaJ domain 372 435 IPR001623 -
Mibi06g2255 493 PRINTS DnaJ domain signature 374 392 IPR001623 -
Mibi06g2255 493 PRINTS DnaJ domain signature 392 407 IPR001623 -
Mibi06g2255 493 PRINTS DnaJ domain signature 410 430 IPR001623 -
Mibi06g2255 493 PRINTS DnaJ domain signature 430 449 IPR001623 -
Mibi06g2255 493 SUPERFAMILY TPR-like 47 367 IPR011990 GO:0005515
Mibi06g2255 493 Coils Coil 408 428 - -
Mibi06g2255 493 ProSiteProfiles TPR repeat profile. 200 233 IPR019734 GO:0005515
Mibi06g2255 493 CDD DnaJ 372 427 IPR001623 -
Mibi06g2255 493 Pfam Tetratricopeptide repeat 260 328 - -
Mibi06g2255 493 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 23 493 IPR044620 -
Mibi06g2255 493 Gene3D Tetratricopeptide repeat domain 40 369 IPR011990 GO:0005515
Mibi06g2255 493 Pfam Tetratricopeptide repeat 201 233 IPR013105 -
Mibi06g2255 493 ProSiteProfiles dnaJ domain profile. 372 438 IPR001623 -
Mibi06g2255 493 SMART tpr_5 200 233 IPR019734 GO:0005515
Mibi06g2255 493 SMART tpr_5 318 351 IPR019734 GO:0005515
Mibi06g2255 493 SMART tpr_5 51 84 IPR019734 GO:0005515
Mibi06g2255 493 SMART tpr_5 85 118 IPR019734 GO:0005515
Mibi06g2255 493 SMART tpr_5 284 317 IPR019734 GO:0005515
Mibi06g2255 493 Gene3D DnaJ domain 370 478 IPR036869 -
Mibi06g2255 493 Pfam Tetratricopeptide repeat 65 119 - -
Mibi06g2255 493 FunFam DnaJ subfamily C member 7 370 478 - -
Mibi06g2255 493 SUPERFAMILY Chaperone J-domain 366 476 IPR036869 -
Mibi06g2255 493 FunFam DnaJ domain containing protein 38 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2255 Mibi-ChrMibi06 42966581 42971432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2255 368 435 C2H2 Transcription Factor Family AT1G74250 48.611 1.66e-11 64.7