Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2242 ATGATTACATTTCTGGAGGTAAATGAGAACTTGAAAGAAGAGGAAAAATGCTTGGATGATCAACTATGGCATGCTTGTGCCGGCCCGATGGTAAAAATGCCTCCCTTAAACTCTAAGGTGTTTTACTTCCCTCAGGGTCATGCTGAGCATGCAAGTGGACTCGTAGATTTCAAGAAATGCCATAGGTTTCCTCTTCCACCTTACATATTATGCAGGGTTGAGTCTGTGAAGTACATGGCTGATGAGGATACGGATGAGGTATTTGCGAAACTAAAGCTTGTTCCTTTTAATGGAAACGAGGCTGATTATGATGTGGACGATGATGATGGAGGCGGTACCAATGGAATTGAAGCTCAAGAAAAGTTTGCATCGTTCTCAAAATCTCTGACTCAATCCGACGCTAATAATGGTGGTGGTTTTTCTATTCCTAGGTACTGTGCAGAGACAATTTTCCCACGTTTGGACTTTTCTGCGAATCCGCCTCATCAGTATATTGAGGTTAAAGATGTTCATGGAGAATCATGGAAATTCAAGCACATTTACCGAGGAACACCAAGGCGGCATCTTTTGACCACAGGATGGAGTCCATTTGTGACCAAGAAAAAGCTGATTGCAGGGGATTCGATAGTGTTTTCGAGAGGAAAGGATGGAGATCTCTATGTCGGGATTCGACGGGCTAAAAGAGGATATGTTCGTCGATTTGAGTCATCATCAGTGGGGAGTTCAGAGAGTCAAAACTGTTCTCTACCTTATGAAGGATTATTTTCAGCTTTCTTGAACGGAGACGATAGCAAAAAACCAGTGACCAATAACGGTATTGGCAACAATGGAATGATTCGTTCAAGAGGAAGGATAATGGGGAGTGGGAAAGTAAAAGCTGAAGCAGTTATTGAAGCTGTGACTCTTGCTTCTAATGGACAACCATTTGAAGTTGTGTACTATCCAAGAGCAAGCACACCTGAGTTCTGTGTAAAAGCCTCTTCAGTAAAAATAGCTCTGCAAATTCGGTGGTGTTCTGGAATGAGGTTCAAGATGGCTTTTGAAACAGAGGATTATTCAAGAACAAGTTGTTTTATGGGAACTATATCTTCAGTACAGGTTTCTGATCCTATACTTTGGCCCGATTCACCTTGGAGGCTTCTTCAGGTTACTTGGGATGAACCAGATTTACTTCAGAATGTGACACGGGTGAGCCCATGGTTGGTTGAATTGGTGACGAATATGCCTGCAATTCCTCCACTTTTCTCACCACCAAGAAAGAAAATGAGGTTGCATGATCAACATTCAAATATTTCACTTGATACTACTCAGATTTATGCGCCTACGTTCGCTAGCAATTTCCTAGGTCACATGAACAATCCATTTGGGTATTATGTACCTGAAATCACTTCTCCTGCTGGCATGCAGGGAGCCAGGCATGCTTATTATGGTTTACCATTACCAGATCTCCACCTCAATAAATTACAGTCGCCTCTATATTTTACTGGTTTCCCAGCTCTTGCTCAAGCTTCTATGCAGAACGGGGTTTGTTATAACTCGGCAATGCAAAAGAATAACATGAGTGAGAATGTGTCCCACTTGATTTCCAATGAAAACTCTGTCCAGTCTTTGAAGGAAGGGGATGATAACAAGACACCCCACCTTGTGCTTTTTGGGAAAAAGATCCATCCAGAGTATCAGATGTCGTAA 1689 0.4221 MITFLEVNENLKEEEKCLDDQLWHACAGPMVKMPPLNSKVFYFPQGHAEHASGLVDFKKCHRFPLPPYILCRVESVKYMADEDTDEVFAKLKLVPFNGNEADYDVDDDDGGGTNGIEAQEKFASFSKSLTQSDANNGGGFSIPRYCAETIFPRLDFSANPPHQYIEVKDVHGESWKFKHIYRGTPRRHLLTTGWSPFVTKKKLIAGDSIVFSRGKDGDLYVGIRRAKRGYVRRFESSSVGSSESQNCSLPYEGLFSAFLNGDDSKKPVTNNGIGNNGMIRSRGRIMGSGKVKAEAVIEAVTLASNGQPFEVVYYPRASTPEFCVKASSVKIALQIRWCSGMRFKMAFETEDYSRTSCFMGTISSVQVSDPILWPDSPWRLLQVTWDEPDLLQNVTRVSPWLVELVTNMPAIPPLFSPPRKKMRLHDQHSNISLDTTQIYAPTFASNFLGHMNNPFGYYVPEITSPAGMQGARHAYYGLPLPDLHLNKLQSPLYFTGFPALAQASMQNGVCYNSAMQKNNMSENVSHLISNENSVQSLKEGDDNKTPHLVLFGKKIHPEYQMS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2242 562 Gene3D - 123 227 IPR015300 -
Mibi06g2242 562 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 556 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi06g2242 562 SMART B3_2 125 227 IPR003340 GO:0003677
Mibi06g2242 562 ProSiteProfiles B3 DNA-binding domain profile. 125 227 IPR003340 GO:0003677
Mibi06g2242 562 Gene3D - 336 409 - -
Mibi06g2242 562 FunFam Auxin response factor 337 410 - -
Mibi06g2242 562 Pfam B3 DNA binding domain 125 226 IPR003340 GO:0003677
Mibi06g2242 562 SUPERFAMILY DNA-binding pseudobarrel domain 118 226 IPR015300 -
Mibi06g2242 562 Pfam Auxin response factor 299 382 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mibi06g2242 562 CDD B3_DNA 124 225 IPR003340 GO:0003677
Mibi06g2242 562 FunFam Auxin response factor 123 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2242 Mibi-ChrMibi06 42868632 42870405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2242 15 562 B3 DNA Binding Superfamily AT4G30080 54.480 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi06g2242 B3 2.3e-22 CL0405