Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2240 ATGACAATATCAATCGAGTTGTCGAAATCACAGGCTGAAGTAGATAGCTCCATGGCTTCTGGTGAATCAAGAACTGTGAGGTTTCAGAATCATGATCTTGAGACTGAGTTGAAACCAATGAGCAAAGAAAGTCCCATGTCAAATCAGGCCGCCTATAAGATGAATGATAAAAAGATGGGCTTGTGGAAGAAGGAAAGGGAACTATCGAGGGTATTCTCTGAGGATTACGATACCACAGAGAAGTTGGTATTGGACCCTAGGGGACCAAGAATGAACGTATGGAACAAAGTCTTCTTAGTGGCATGCCTGGTTTCTTTATTTGTGGATCCCTTGTTCTTTTACTTGCCAGAGGCTAAGAAAGACAAGTGCATTGATTTGTCCATTCGCCTTGAAGTGTCCCTCACCATAATTCGCTCCATGGTGGATGCATTTTACATATTCCAGATTTATGTTCGCTTTCAAACTGCTTATGTTGCTCCTTCCTCTCGCGTTTTTGGTAGAGGAGAGCTCATCATTGACCCTTCCAAGATATCATCCAAATATCTTCGAAGAGACTTCTGGCTTGATGTTGTGGCTGCCCAACCTCTTCCTCAGGTGGTGGTATGGCTTGTAATTCCAAATCTCAAGTGTTCACAAATGATTACTTCAAGGCATATACTGCGCCTTGCCACCATTTTCCAGTACTTATTAAGGTTATATCTCATCTTCCCTCTATCATCCCAGATCGTCAAGGCCAACGGGGTGATGATGGAAAAAGCTTGGGCAGGGGCAGCATATAATCTCATGCTCTATATGCTAGCAAGTCATGTTTTAGGGTCGTGCTGGTACCTCTTATCAATTGAAAGGCAAGAAGAGTGCTGGAAAAAAGTGTGTAGCCTTCAACACCCAAAATGCCAGTATTATTATCTGGAGTGTGGAAGTGTAGGTGATCCCAACAGGGTAGCCTGGTTCAGAACAAGCAATATCTCTGGCCTATGTGATGATCCTAGTAGTGATTTCTTTAAATCTGGCATTTTTTCTGATGCACTGACTTTGGGAATCACTGGCTCGGAGTTCTTCATCAAATACTTTTACTGTCTCTGGTGGGGACTGAGGAATCTCAGTTCTCTAGGACAGAACCTGTTGACAAGCCTTCAGGTTGCAGAGATAAATTTTGCTGTGATCATAGCAATTCTAGGCCTGGTACTTTTTGCCCAGCTTATAGGCAACATGCAGATGTTCCTGCAATCAACAACCATGAGGTTGGAAGAATGGAGAATAAGAAGAACAGACACAGAGAGATGGATGAGGCACAGGCAGCTACCTCGTGATCTTAAGCAAAACGTTCGACGATACGAACAATTCAGGTGGGTTGCCACACGTGGAGTTGACGAGGAAGTCATCCTCAGAGACCTTCCTGCTGATCTCAGACGTGACATTAAACGTCACCTCTGCCTCAACCTAGTCCGACAAGTGCCATTATTTGATCAGATGGAGGAGAGGATGCTGGATGCGATATGCGAGAGGTTGAAGCCATCTCTGTGCACGCCAGGGACAAGGCTGATTCGAGAAGGTGATCCAGTGAATGAGATGCTATTCATAGTGAGAGGTCACTTGGATTCATACACAACTAATGGTGGAAGAACAGGGTTCTTCAATTCATGCAGAATAGGGGCTGGTGATTTCTGCGGTGAAGAGCTGTTGCCTTGGGTTCTAAATCCTCGTCCTAGTTCAATGTTTCCTTCTTCAACTCGCACTGTGAAAGCCATGACTCATGTTGAAGCTTTTGCTCTCATAGCAGAGGATTTACAGTTTGTGGCAGATCAGTTTCGGAGGCTGCATAGTAAACAATTGAGGCACACTTTCAGGTTTTATTCCCAGCAATGGAGGACATGGGCTGCTTGTTTCGTACAAGCTGCTTGGTTTAATCATAAGAGGAGAAGAGAGGCCAGGGAGATCGAGAAGAAGCAGAATCGTCACTTGGCTGTGATGCACTCTGTGAATTCAACTTATACAGGCATGGAATATTTCTCTGCACCTCTGCAACAACACATGGAGTACTCTAATAGTACTAATCTTACAAGGTATCCTGTTAGAGGTGGGAGCTTGCGATATGGTTCTGATGTTAATATTCTTCGTTCATTGAGGAAGCCTGTTGAACCTGACTTCTCCATGGATGACGCTTGA 2166 0.4437 MTISIELSKSQAEVDSSMASGESRTVRFQNHDLETELKPMSKESPMSNQAAYKMNDKKMGLWKKERELSRVFSEDYDTTEKLVLDPRGPRMNVWNKVFLVACLVSLFVDPLFFYLPEAKKDKCIDLSIRLEVSLTIIRSMVDAFYIFQIYVRFQTAYVAPSSRVFGRGELIIDPSKISSKYLRRDFWLDVVAAQPLPQVVVWLVIPNLKCSQMITSRHILRLATIFQYLLRLYLIFPLSSQIVKANGVMMEKAWAGAAYNLMLYMLASHVLGSCWYLLSIERQEECWKKVCSLQHPKCQYYYLECGSVGDPNRVAWFRTSNISGLCDDPSSDFFKSGIFSDALTLGITGSEFFIKYFYCLWWGLRNLSSLGQNLLTSLQVAEINFAVIIAILGLVLFAQLIGNMQMFLQSTTMRLEEWRIRRTDTERWMRHRQLPRDLKQNVRRYEQFRWVATRGVDEEVILRDLPADLRRDIKRHLCLNLVRQVPLFDQMEERMLDAICERLKPSLCTPGTRLIREGDPVNEMLFIVRGHLDSYTTNGGRTGFFNSCRIGAGDFCGEELLPWVLNPRPSSMFPSSTRTVKAMTHVEAFALIAEDLQFVADQFRRLHSKQLRHTFRFYSQQWRTWAACFVQAAWFNHKRRREAREIEKKQNRHLAVMHSVNSTYTGMEYFSAPLQQHMEYSNSTNLTRYPVRGGSLRYGSDVNILRSLRKPVEPDFSMDDA 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2240 721 CDD CAP_ED 487 618 IPR000595 -
Mibi06g2240 721 FunFam Cyclic nucleotide-gated ion channel 1 414 478 - -
Mibi06g2240 721 FunFam Cyclic nucleotide-gated ion channel 1 485 603 - -
Mibi06g2240 721 Gene3D Helix hairpin bin 414 478 - -
Mibi06g2240 721 SUPERFAMILY Voltage-gated potassium channels 85 409 - -
Mibi06g2240 721 MobiDBLite consensus disorder prediction 1 22 - -
Mibi06g2240 721 Pfam Cyclic nucleotide-binding domain 510 598 IPR000595 -
Mibi06g2240 721 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 66 661 - -
Mibi06g2240 721 Gene3D Jelly Rolls 485 605 IPR014710 -
Mibi06g2240 721 Pfam Ion transport protein 93 414 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi06g2240 721 SMART cnmp_10 487 618 IPR000595 -
Mibi06g2240 721 ProSiteProfiles cAMP/cGMP binding motif profile. 487 572 IPR000595 -
Mibi06g2240 721 SUPERFAMILY cAMP-binding domain-like 417 609 IPR018490 -
Mibi06g2240 721 PRINTS EAG/ELK/ERG potassium channel family signature 382 393 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g2240 721 PRINTS EAG/ELK/ERG potassium channel family signature 356 373 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g2240 721 PRINTS EAG/ELK/ERG potassium channel family signature 266 276 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g2240 721 PRINTS EAG/ELK/ERG potassium channel family signature 400 409 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g2240 721 PRINTS EAG/ELK/ERG potassium channel family signature 450 457 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g2240 721 PRINTS EAG/ELK/ERG potassium channel family signature 149 158 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g2240 721 Gene3D - 97 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2240 Mibi-ChrMibi06 42843022 42847685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2240 60 719 Ion Channels AT2G28260 63.238 0.0 874