Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2238 ATGGAAGCCGTCGCCACCATCGATAGTTTATGCCTGAGCGGCGGAGGAGTCAACGTTAACGTTGACCCACTGAACTGGGGTGTAGCGGCGGAGTCACTGAAGGGAAGCCACTTGGATGAGGTGAAGCGTATGGTGGAGGAGTTCAGGAAGCCGGTGGTCCGTCTCGGCGGAGAGACTCTGACGATATCACAGGTGGCGGCCGTCGCCGCCCACGACCAAGGCGTGAAGGTGGAGCTGTCGGAGTCAGCCAGGGCTGGCGTTAAGGCGAGCAGTGATTGGGTGATGGATAGTATGAACAAAGGTACCGATAGTTATGGTGTTACCACCGGCTTTGGTGCTACTTCCCACCGTCGAACCAAACAAGGTGCTGCTCTTCAGAAAGAGCTTATTAGATTCCTGAACGCTGGAATATTTGGCAACTCCACAGAGTCATGCCACACTCTGCCACACACAGCAACCAGAGCGGCCATGCTGGTAAGAATCAACACTCTCCTACAAGGCTACTCCGGCATCAGATTCGACATCTTAGAAGCCATCACCAAGTTCCTCAACCACAACATCACTCCTTGTCTCCCTCTTCGTGGCACCATCACAGCCTCCGGCGACCTCGTACCTCTCTCCTACATAGCTGGCCTCCTCACTGGCCGACCAAACTCCAAAGCCGTGGGACCCACCGGCGAACTTCTCACCCCTAAGGAAGCTTTCCAATTGGCTGGCATTGATTCTGACTTCTTTGAATTACAGCCCAAGGAAGGCCTTGCCCTTGTTAATGGCACAGCCGTTGGTTCTGGTTTGGCCTCTATGGTTCTGTTTGAGGCCAACATTTTGGCTGTTTTGTCTGAAGTTTTGTCGGCTATTTTTGCTGAAGTTATGCAGGGGAAGCCTGAATTTACTGACCATTTGACACATAAATTGAAGCACCATCCTGGTCAGATTGAGGCTGCTGCTATCATGGAACACATTCTTGATGGGAGTTCTTACGTGAAAGAGGCTAAGAAATTGCATGAGATTGATCCCCTGCAGAAGCCAAAACAGGATCGTTATGCTCTTCGAACTTCACCCCAATGGCTTGGTCCTCTCATTGAGGTCATCAGATTCTCCACCAAATCCATTGAGAGGGAGATCAATTCTGTGAACGACAACCCTTTGATTGACGTTTCAAGGAATAAGGCACTTCACGGTGGTAATTTCCAAGGAACCCCAATTGGGGTCTCCATGGATAACACTCGTTTGGCTCTGGCATCTATAGGGAAGCTCATGTTTGCTCAATTTTCTGAGCTGGTTAATGATTTTTACAACAATGGGTTGCCTTCAAATCTCTCTGGGGGTAGAAACCCAAGCTTGGATTATGGTTTCAAGGGTGCTGAAATCGCCATGGCATCTTACTGCTCTGAGCTTCAGTATCTTGCAAACCCAGTAACAAGCCACGTCCAGAGTGCTGAGCAACACAATCAGGATGTGAACTCCTTGGGTCTAATTTCGTCCAGAAAAACCAATGAAGCCATTGAAATCCTGAAGCTCATGTCTTCCACATACCTCATTGCACTTTGCCAGGCGATTGATCTGAGGCATCTGGAGGAGAACTTGAAGAGCATAGTGAAGAGCACCGTGAGTCAGGTCGCAAAGAGAACTCTCACCACAGGGGTGAACGGAGACCTTCATCCTTCTAGATTTTGTGAGAAAGATTTGCTCAAAGTGGTGGATAGGGAGCATGTATTTACCTACATTGATGACCCTACCAGTGCTACATACCCATTGATGCAGAAACTAAGGCAAATTCTGGTAGATCACGCACTGGAAAATGGTGAGAACGAGAAGAACATGACCACCTCGATCTTCCAAAAGATTGCAACTTTTGAGGAGGAACTGAAGACTGTGTTGCCAAAGGAGGTTGAGAGTGCAAGAAATGCGTACGAGAATGGCAATTCATCACTCCCAAACAAGATCAAGGAATGTAGATCGTACCCATTGTACAAGTTTGTGAGGGAGGATCTGGGAACAGGGTTGCTTACTGGAGAGAAGACGAGGTCACCAGGTGAAGAGTGTGACAAAGTGTTCACTGCTCTGTGTCAGGGGAAGATTATTGATCCTCTTCTGGAATGCCTTGGGGAATGGAATGGTGCTCCTCTTCCACTATGTTAG 2142 0.4879 MEAVATIDSLCLSGGGVNVNVDPLNWGVAAESLKGSHLDEVKRMVEEFRKPVVRLGGETLTISQVAAVAAHDQGVKVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNSTESCHTLPHTATRAAMLVRINTLLQGYSGIRFDILEAITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPTGELLTPKEAFQLAGIDSDFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKEAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTYLIALCQAIDLRHLEENLKSIVKSTVSQVAKRTLTTGVNGDLHPSRFCEKDLLKVVDREHVFTYIDDPTSATYPLMQKLRQILVDHALENGENEKNMTTSIFQKIATFEEELKTVLPKEVESARNAYENGNSSLPNKIKECRSYPLYKFVREDLGTGLLTGEKTRSPGEECDKVFTALCQGKIIDPLLECLGEWNGAPLPLC 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2238 713 FunFam Phenylalanine ammonia-lyase 260 556 - -
Mibi06g2238 713 SUPERFAMILY L-aspartase-like 22 713 IPR008948 GO:0003824
Mibi06g2238 713 FunFam Phenylalanine ammonia-lyase 526 647 - -
Mibi06g2238 713 Gene3D Fumarase/aspartase (Central domain) 260 708 - -
Mibi06g2238 713 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 22 702 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mibi06g2238 713 Pfam Aromatic amino acid lyase 60 532 IPR001106 -
Mibi06g2238 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841
Mibi06g2238 713 Gene3D - 526 647 IPR023144 -
Mibi06g2238 713 FunFam Phenylalanine ammonia-lyase 15 259 - -
Mibi06g2238 713 PANTHER HISTIDINE AMMONIA-LYASE 18 713 IPR001106 -
Mibi06g2238 713 CDD PAL-HAL 58 523 IPR001106 -
Mibi06g2238 713 Gene3D - 13 259 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2238 Mibi-ChrMibi06 42828728 42831729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2238 22 713 Monolignol Biosynthesis Gene Families AT2G37040 84.104 0.0 1244