Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2230 ATGCAAAGCACCACCTTTTCTTGCTCCCCAATCCCTTTTGCTCTTATCTTTGAAGCTGCCGCGTGGGGATATTCTCTTCGTTTTCAATTTTGGTTGCTCGTTTGGAGGCGCTCTATTGGCAGAGAATTCTCTCACAATATTGCGAAAACGGGGAATTCTTTGTGTTTCAAAGCTGAATCCCCTCGCGATCGATCGTACCAGTTACATGTAATACAGTCCAATAGTTCTCCAATGAAGTGCTTTTCATTTCACTACGGAGATAAGAAGGATGATCCGAAGAGCATTAAGTCAATTTCGGGTCTGTCTAACTGTTCCACATATGGCGAGGGTGATCTGAGAAGATCTGGCTCTGAATTTAATTCTCAGAATGTTTCTGACAATAGCACAGACTCCCTTAGGAGAACTTCGTTTCCAAGTTTGTCTCAAAGACCCAGCAACCTGAGAGTGTTTACTGTGTCTGAACTGAAATCGGCCACTAAAAATTTTGGCCGCACTGTTATGATTGGAGAGGGTGGGTTTGGTTGTGTCTACAAGGGATTGATCAAGAGCTTAGACGACCCATACAAAAAAATTGAAGTTGCAGTTAAACAACTTGGTAGAAGAGGAATGCAGGGCCATAAGGAATGGGTGACAGAAGTGAATGTTCTGGGCATTGTTGAGCATCCTAATCTTGTAAAACTTGTGGGTTACTGTGCTGATGATGATGAAAGAGGAATCCAGCGCCTTCTGGTTTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCCTCTCGATCAGAGACCCCTCTCTCATGGAGTAGGAGATTAAAAATAGCTCAAGATGCAGCTCGTGGTTTAACATATCTTCATGAAGAAATGGATTTTCAGATAATCTTCAGAGATTTCAAATCTTCCAATATCCTTTTGGACGATCAGTGGAATGCAAAGCTTTCAGATTTTGGATTAGCAAGATTGGGCCCATCTGAAGGGTTGACTCATGTCTCAACAGCGGTTGTTGGAACGATGGGATACGCAGCTCCTGAATATATTCAAACTGGACGTCTTACATCAAAAAGTGATGTGTGGAGTTATGGTGTATTTCTCTATGAACTCATCACTGGCAGGCGCCCTGTGGACCGAAATCGTCCCAAGGGTGAACAGAAGCTCTTGGAATGGGTAAGGCCATACCTATCAGATGGGAAAAAGTTTCAACTAATATTGGATCCAAGGCTTGACAGGAAACCCCTCTTCAAGTCAGCACAGAGACTTGCCATTATAGCCAACAGATGCTTGGTCAAAAACCAGAAGAATCGGCCAAAAATGAGTGAGGTATTGGAAATGGTGAATCGACTGGTAGAATCTTCAACTGTCACTAGTCCACAGAAATCCCTGGAGAGTTCGGAATCCGTTGAAGTTTCCCAGGGCACTGAAACAAAGAAAAAGAGAAGGATTATGGATCTAAAACCTGGAGAAAATAGTTGGTTGGTTTGGTTGTGGAGACCAAAGCTTTTAAAAGTATGTTGA 1509 0.4274 MQSTTFSCSPIPFALIFEAAAWGYSLRFQFWLLVWRRSIGREFSHNIAKTGNSLCFKAESPRDRSYQLHVIQSNSSPMKCFSFHYGDKKDDPKSIKSISGLSNCSTYGEGDLRRSGSEFNSQNVSDNSTDSLRRTSFPSLSQRPSNLRVFTVSELKSATKNFGRTVMIGEGGFGCVYKGLIKSLDDPYKKIEVAVKQLGRRGMQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSVEHHLSSRSETPLSWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSEGLTHVSTAVVGTMGYAAPEYIQTGRLTSKSDVWSYGVFLYELITGRRPVDRNRPKGEQKLLEWVRPYLSDGKKFQLILDPRLDRKPLFKSAQRLAIIANRCLVKNQKNRPKMSEVLEMVNRLVESSTVTSPQKSLESSESVEVSQGTETKKKRRIMDLKPGENSWLVWLWRPKLLKVC 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2230 502 MobiDBLite consensus disorder prediction 452 479 - -
Mibi06g2230 502 Pfam Protein tyrosine and serine/threonine kinase 167 441 IPR001245 GO:0004672|GO:0006468
Mibi06g2230 502 CDD STKc_IRAK 168 446 - -
Mibi06g2230 502 MobiDBLite consensus disorder prediction 113 140 - -
Mibi06g2230 502 Gene3D Transferase(Phosphotransferase) domain 1 248 471 - -
Mibi06g2230 502 SUPERFAMILY Protein kinase-like (PK-like) 136 443 IPR011009 -
Mibi06g2230 502 ProSiteProfiles Protein kinase domain profile. 162 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2230 502 FunFam Serine/threonine-protein kinase PCRK2 248 457 - -
Mibi06g2230 502 PANTHER OS01G0588500 PROTEIN-RELATED 126 445 - -
Mibi06g2230 502 FunFam Serine/threonine-protein kinase BIK1 128 247 - -
Mibi06g2230 502 ProSitePatterns Protein kinases ATP-binding region signature. 168 196 IPR017441 GO:0005524
Mibi06g2230 502 MobiDBLite consensus disorder prediction 452 468 - -
Mibi06g2230 502 Gene3D Phosphorylase Kinase; domain 1 142 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2230 Mibi-ChrMibi06 42746478 42750177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2230 78 440 Glycoside Hydrolase AT3G07070 43.432 4.56e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi06g2230 PK_Tyr_Ser-Thr 3.7e-47 CL0016