Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2217 ATGTCACAAGATTCTGTGGAGATAAAGACGATTGAGCAGTGGAGATGGTCGGAAATGCAAGGCCTTGAACTCGTCTCTCCTCCTACTTCTGAACCAACGCAAACAGAGGAAAACAGAGAGACAAAGCCAATGGAGGCTGTTCAAGAGGAAGACCGAAAGGAACTTAAAAATCTCGCTAATGGCGGTGGTGCGGAGAAGCCGAAGAATATTCCGGCGGTTGGATTTGGTGAGCTTTTCAGATTTGCCGATGGGTTGGATTACATTCTGATGGGTATAGGAACGGTTGGAGCAATCGTACACGGTTGTTCTCTGCCTTTATTTCTCAGGTTCTTCGCCGATCTCGTCAATTCTTTTGGGTCGAATGCCAATAATGTGGACAAGATGACCCAGGAAGTTGTCAAGTACGCATTTTACTTCCTGGTGGTGGGTGCTGCCATATGGGCATCATCATGGGCAGAGATATCTTGCTGGATGTGGACTGGAGAGAGGCAATCAACGAAGATGAGGATCAAGTACCTTGAAGCTGCCTTAAACCAGGACATTCAATACTTTGACACAGAGGTCAGAACATCCGACGTCGTTTTTGCCATCAACACTGATGCAGTCATGGTCCAGGACGCCATTAGCGAGAAGCTGGGTAATTTCATTCACTACATGGCTACTTTTGTTTCTGGATTCGTGGTTGGTTTCACCGCCGTTTGGCAATTAGCTCTTGTTACCTTGGCCGTAGTACCTATGATAGCTGTAATCGGAGGCATTCACACCACCACCTTGACCAAACTCTCTGCCAAAGGCCAAGAAGCTCTCTCCAAAGCTGGAAACATCGCAGAACAGACAATCGTGCAGATTCGAGTAGTACTGGCTTTCGTGGGTGAGAATCGAGCATTACAGGAGTACTCTTCGGCGTTGAAGGTAGCCCAAAAGATTGGCTACAAAAGTGGTTTCGCTAAGGGTATGGGATTAGGAGCAACATACTTTGTCGTTTTCTGCTGTTATGCGCTCCTATTATGGTACGGCGGCTACCTCGTCAGGCACCACTACACCAACGGAGGACTCGCCATTTCCACCATGTTCGCTGTCATGATTGGTGGATTGGGTTTGGGGCAATCTGTGCCTAGCATCGCTGCTTTCACAAAGGCCAGAGTCGCCGCGGCGAAAATTTTCCGAATCATTGATCACAAACCGAGTATTGACCGAAATACTGATTCGGGTTTGGAATTAGAGTCCGTAACTGGGTTAGTTGAGCTCAAAAATGTAGATTTCTCGTACCCTTCAAGGCCAGATGTTCGGATCCTCAATGATTTCTCTTTGAATGTGCCGGCCGGCAAGACCATAGCTTTGGTCGGAAGCAGTGGCTCCGGCAAGAGCACCGTCGTCTCCCTCATCGAGAGATTCTATGACCCCACCTCAGGACAAGTTCTGCTAGATGGGCAGGACATTAAAACGTTGAAGCTGAAGTGGCTGAGGCAGCAAATAGGACTTGTAAGCCAAGAGCCTGCTTTATTTGCAACCACTATTCGAGAAAATATATTGTTGGGTAGGCCTGATGCTGATCAAGTGGAGATTGAGGAAGCTGCAAGAGTAGCTAATGCTCATTCTTTTATCATCAAGCTCCCTGACGGCTACGAAACCCAGGTAGGAGAGAGAGGTCTGCAACTCTCTGGAGGGCAGAAGCAGAGAATAGCAATAGCAAGGGCTATGCTGAAAAACCCAGCAATTCTTCTTTTGGATGAGGCAACAAGTGCACTGGACTCTGAATCTGAAAAACTAGTGCAAGAAGCCCTTGACCGGTTCATGATTGGCAGAACAACTCTTGTAATTGCCCATCGCCTTTCCACCATTCGTAAAGCTGATCTTGTTGCCGTGCTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTCTTCGCTAAGGGCGAAAATGGAGTTTATGCCAAGCTTATCCGGATGCAAGAAACGGCACATGAAAATGCTATGAATAATGCCAGAAAGAGCAGTGCAAGGCCTTCAAGTGCAAGAAATTCTGTAAGCTCCCCAATAATTGCTCGGAATTCTTCTTATGGCCGCTCACCATATTCACGCAGGCTATCTGACTTCTCTACTTCTGATTTTAGTCTATCCCTTGATGCTTCACATCCAAACTACAGGCTTGAAAAGCTTGCCTTCAAAGAGCAAGCCAGTTCCTTTTGGCGCCTTGCAAAAATGAATTCCCCTGAATGGCTTTATGCTTTTGTTGGTTCTATAGGTTCCGTTATTTGCGGATCTCTCAGTGCATTCTTTGCTTATGTCCTCAGTGCTGTCCTCAGTGTCTATTACAACCCAAACCACAGATACATGATCCGAGAAATAGAAAAGTATTGCTACTTGTTGATTGGACTTTCATCAGCTGCTCTTCTCTTCAATACACTACAACACTTCTTTTGGGATATTGTTGGCGAAAACCTTACTAAACGAGTGCGGGAGAAAATGCTTACTGCTGTACTGAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCCCGTGTTGCAGCAAGGCTCGCCCTTGATGCGAACAATGTTAGATCAGCCATTGGAGACCGGATTTCAGTAATTGTGCAGAACACTGCGCTTATGCTAGTTGCTTGTACCGCAGGGTTTGTATTGCAATGGCGCCTTGCACTTGTCCTTATAGCTGTCTTCCCCGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGAGACTTGGAAGCTGCACATGCCAAGGCCACACAACTTGCAGGGGAGGCTATAGCAAATGTAAGAACTGTTGCGGCCTTCAATTCAGAAACAAAAATTGTTGGTCTTTTCACTTCCAACCTTGAAACCCCACTACGACGTTGCTTTTGGAAGGGGCAAATTTCTGGAATTGGATTTGGCATAGCTCAGTTTGCACTCTATGCTTCATATTCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCATGGAATCTCTGATTTCTCTAAAACAATCAGAGTCTTTATGGTTCTTATGGTCTCTGCCAATGGTGCTGCTGAAACTTTAACCCTGGCTCCTGACTTCATTAAGGGAGGTCGAGCCATGAGATCAGTCTTTGAACTTCTTGATCGTAGAACTGAAATTGAACCAGATGAACCAGATGCTATCCCTGTTCCTGATCGGCTTCGTGGAGAAATTGAACTCAAGCACGTAGACTTTTCTTACCCCACTCGCCCAGATATGCCTGTTTTTCGTGATCTCAGTCTTCGTGCTAGGGCAGGTAAAACTCTTGCCCTCGTAGGACCTAGTGGCTGTGGTAAGAGCTCAGTGATTGCCCTTGTACAGAGATTTTATGATCCAACTTCTGGGCGGGTTATGATTGATGGAAAGGACATTAGAAAATACAATCTCAAGTCCCTCAGACGCCACATTGCCATTGTACCTCAAGAGCCTTGCTTGTTTGCTTCTTCTATACACGAAAACATAGCTTATGGGAATGAGTCAGCAACTGAAGCTGAGATAATTGAAGCAGCGACTCTTGCCAATGCTCACAAGTTCATATCCTCCTTGCCAGATGGATACAAAACCTTTGTTGGGGAAAGAGGAGTTCAGTTATCTGGAGGACAAAAACAAAGAATAGCAATAGCCCGAGCTTTTGCGAGGAAGGCGGAGATTATGCTTCTTGATGAGGCAACAAGCGCGCTTGATGCTGAATCTGAGAGGTCTGTTCAAGAGGCTCTAGACCGTGCTTGCTCTGGAAAAACTACTATTATTGTTGCTCACAGGCTATCAACTATTAGAAATGCTAATGTGATTGCTGTGATAGATGATGGGAAAGTGGCAGAGCAAGGATCTCACTCACAGTTGTTGAAAAATCACCCTGATGGGATATATGCACGTATGATTCAACTACAAAGGTTCACACACAACCAAGTTATTGGGATGGCCCCTGGTTCAAGTTCTGCAAGACCAAAAGATGATGATGAAAGAGAAGGTTAG 4008 0.4573 MSQDSVEIKTIEQWRWSEMQGLELVSPPTSEPTQTEENRETKPMEAVQEEDRKELKNLANGGGAEKPKNIPAVGFGELFRFADGLDYILMGIGTVGAIVHGCSLPLFLRFFADLVNSFGSNANNVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLTKLSAKGQEALSKAGNIAEQTIVQIRVVLAFVGENRALQEYSSALKVAQKIGYKSGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAISTMFAVMIGGLGLGQSVPSIAAFTKARVAAAKIFRIIDHKPSIDRNTDSGLELESVTGLVELKNVDFSYPSRPDVRILNDFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGQDIKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPDGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGVYAKLIRMQETAHENAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRLEKLAFKEQASSFWRLAKMNSPEWLYAFVGSIGSVICGSLSAFFAYVLSAVLSVYYNPNHRYMIREIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARVAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSETKIVGLFTSNLETPLRRCFWKGQISGIGFGIAQFALYASYSLGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRRTEIEPDEPDAIPVPDRLRGEIELKHVDFSYPTRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAIVPQEPCLFASSIHENIAYGNESATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARAFARKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIIVAHRLSTIRNANVIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFTHNQVIGMAPGSSSARPKDDDEREG 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2217 1335 CDD ABC_MTABC3_MDL1_MDL2 414 653 - -
Mibi06g2217 1335 FunFam ABC transporter B family member 1 1060 1309 - -
Mibi06g2217 1335 MobiDBLite consensus disorder prediction 658 678 - -
Mibi06g2217 1335 ProSitePatterns ABC transporters family signature. 1208 1222 IPR017871 GO:0005524|GO:0016887
Mibi06g2217 1335 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524|GO:0016887
Mibi06g2217 1335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1061 1308 IPR027417 -
Mibi06g2217 1335 MobiDBLite consensus disorder prediction 35 50 - -
Mibi06g2217 1335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 405 653 IPR027417 -
Mibi06g2217 1335 Pfam ABC transporter 432 581 IPR003439 GO:0005524
Mibi06g2217 1335 FunFam ABC transporter B family member 1 404 654 - -
Mibi06g2217 1335 Pfam ABC transporter 1088 1236 IPR003439 GO:0005524
Mibi06g2217 1335 SUPERFAMILY ABC transporter transmembrane region 78 398 IPR036640 GO:0005524|GO:0016020
Mibi06g2217 1335 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 414 650 IPR003439 GO:0005524
Mibi06g2217 1335 FunFam ABC transporter B family member 1 725 1034 - -
Mibi06g2217 1335 Gene3D - 1058 1309 IPR027417 -
Mibi06g2217 1335 Gene3D - 404 654 IPR027417 -
Mibi06g2217 1335 FunFam ABC transporter B family member 1 77 412 - -
Mibi06g2217 1335 SUPERFAMILY ABC transporter transmembrane region 733 1056 IPR036640 GO:0005524|GO:0016020
Mibi06g2217 1335 Gene3D ABC transporter type 1, transmembrane domain 1035 1311 IPR036640 GO:0005524|GO:0016020
Mibi06g2217 1335 CDD ABC_6TM_Pgp_ABCB1_D1_like 90 387 - -
Mibi06g2217 1335 CDD ABC_6TM_Pgp_ABCB1_D2_like 735 1051 - -
Mibi06g2217 1335 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 92 379 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g2217 1335 FunFam ABC transporter B family member 19 1035 1057 - -
Mibi06g2217 1335 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1069 1305 IPR003439 GO:0005524
Mibi06g2217 1335 Gene3D ABC transporter type 1, transmembrane domain 725 1034 IPR036640 GO:0005524|GO:0016020
Mibi06g2217 1335 Pfam ABC transporter transmembrane region 91 363 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g2217 1335 Pfam ABC transporter transmembrane region 749 1016 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g2217 1335 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 746 1033 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g2217 1335 SMART AAA_5 441 627 IPR003593 -
Mibi06g2217 1335 SMART AAA_5 1096 1288 IPR003593 -
Mibi06g2217 1335 MobiDBLite consensus disorder prediction 20 50 - -
Mibi06g2217 1335 Gene3D ABC transporter type 1, transmembrane domain 77 666 IPR036640 GO:0005524|GO:0016020
Mibi06g2217 1335 CDD ABC_MTABC3_MDL1_MDL2 1069 1308 - -
Mibi06g2217 1335 PANTHER ABC TRANSPORTER B FAMILY 48 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2217 Mibi-ChrMibi06 42633502 42639269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2217 58 1331 Calmodulin-binding Proteins AT2G36910 87.792 0.0 2310