Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2216 ATGGCGAAGTGCTTCGATCTCAGAACTCTTACATATTCATCGCCCAGACCACCCATTGATATTCCCGACGACCCCACACTCTCACTCACTTCCTTCCTCTTCAAATCCACCTCTTCTTTCCCTAACAACCTCGCCTTCGTCGATTCCGATTCCGATTCCGATTCCGGCGACTCCCTCACCTTCCACCAGCTCAAAATCCATGTCGCCACGCTCGCTCGCTCCTTGTTACGACTCGGCATCAACAAAGGCGACGTCGTTTTGATATTCGCCCCCAACTCCTCATATTTCCTCGTTTCCTTTCTCGCCATTGCCGCCATCGGCGCCGTCGTTACCACCTGCAACCCTATCTACACCGTCTTCGAGATTTCGAACCAACTCCGAGATTCTAATCCCAAACTCGTCATCACCGTCTCCGAGCTTTTCGAAAAAATCAAACCCTCAAATTTGCCCTCCATATTGTTGGATCCTTCGCACTCTGTACTAAAATCATCCAACCCTAAGATTTGGTACTACTCTGATTTGATCAGAACGTCGGATGAAAGCTCCGATTTACCGGAGAACAACGTACGGCAGTCGGACGTGGCGGCGCTGTTGTACTCGTCAGGCACGACGGGGAAAAGCAAGGGAGTGATACTGACACATCGGAATTTCATATCGGCGTCACTGGCTGAAACTTCAGATCAGGATCGATATGGAGAAGGAAGGAACGTGTTCCTGTGTTTCTTGCCGATGCACCATGTGTTTGGGCTTTCGGTGATAACGTATTCGCAGATGAGGAGGGGGAATACGGTGGTGTCAATGAGGAGGTTTGATCTGGAGAAGGCTCTGGAAGCGGTGGAGAAATTCAAGGTGACGTACTTGTATGTTGCTCCGCCGGTAATGATTGAGGTGGTGAAGCGGAGGGACGTTCTGAGAAAGTATGATTTGTCGTCACTGAAACAGCTCGCTGGAGGTGCTGCACCATTGGGCAAAGATGTGATGCAGGAGTGTGCTAAGCTTCTTCCACATGTCGAGATTATTCAGGGATATGGCATGACAGAAGCATGTGGAATTGTTTCCTTAGAGAATGCAAAGGAAGGATGCAGTCTTTCTGGTTCGACGGGATCACTGCTTCCGGGCTTCGAATCCCGCATAGTTAATTTGGATACATCCAAGCCCCTTCCACCCAATCAATTAGGAGAAATTTGGCTTCGAGGACCCACTATGATGCAAGGTTATTTTAACAATCCAGAAGCAACCAAGCTGACCATTGATGATCAAGGTTGGGTGCATACAGGAGATCTTGGTTATTTTGATGAGAATGGACAGCTATTTGTGGTAGATCGAATTAAAGAGCTCATCAAGTGTTATGGATATCAGGTAGCGCCAGCTGAACTTGAAGACTTGCTAGTTTCGCACCCTGAGATATTAGATGCTTGTGTGATTCCAGCCGCTGATGCCAAAGCTGGCGAGGTTCCAGTTGCGTATGTTGTTCGCTCTCCCAACAGCTTGTTAACTGAAGAAGCCGTTCAGAAGTTTGTAGCAGAACAGGTTGCACCCTACAAAAGGTTGAGACGGGTGACGTTTATAGAGAAGGTTCCAAAGTCATTGACAGGAAAAATTTTAAGAAAAGATCTCATTAACATTGATCGACAAACTTCATCGTCAAAGCTATAA 1656 0.4758 MAKCFDLRTLTYSSPRPPIDIPDDPTLSLTSFLFKSTSSFPNNLAFVDSDSDSDSGDSLTFHQLKIHVATLARSLLRLGINKGDVVLIFAPNSSYFLVSFLAIAAIGAVVTTCNPIYTVFEISNQLRDSNPKLVITVSELFEKIKPSNLPSILLDPSHSVLKSSNPKIWYYSDLIRTSDESSDLPENNVRQSDVAALLYSSGTTGKSKGVILTHRNFISASLAETSDQDRYGEGRNVFLCFLPMHHVFGLSVITYSQMRRGNTVVSMRRFDLEKALEAVEKFKVTYLYVAPPVMIEVVKRRDVLRKYDLSSLKQLAGGAAPLGKDVMQECAKLLPHVEIIQGYGMTEACGIVSLENAKEGCSLSGSTGSLLPGFESRIVNLDTSKPLPPNQLGEIWLRGPTMMQGYFNNPEATKLTIDDQGWVHTGDLGYFDENGQLFVVDRIKELIKCYGYQVAPAELEDLLVSHPEILDACVIPAADAKAGEVPVAYVVRSPNSLLTEEAVQKFVAEQVAPYKRLRRVTFIEKVPKSLTGKILRKDLINIDRQTSSSKL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2216 551 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Mibi06g2216 551 CDD 4CL 21 539 - -
Mibi06g2216 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 541 - -
Mibi06g2216 551 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 444 - -
Mibi06g2216 551 FunFam 4-coumarate--CoA ligase 2 445 545 - -
Mibi06g2216 551 SUPERFAMILY Acetyl-CoA synthetase-like 18 545 - -
Mibi06g2216 551 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Mibi06g2216 551 Pfam AMP-binding enzyme 37 449 IPR000873 -
Mibi06g2216 551 Gene3D - 10 444 IPR042099 -
Mibi06g2216 551 Gene3D - 445 547 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2216 Mibi-ChrMibi06 42618758 42623533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2216 1 544 Monolignol Biosynthesis Gene Families AT4G05160 59.890 0.0 656