Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2214 ATGGGTAGAGCTCCTTGTTGCGATAAGGCAAATGTAAAGAAAGGGCCATGGTCTCCTGAAGAAGATGCCAAGCTAAAGGAGTATATACAGAAACATGGCACTGGTGGTAACTGGATTGCTCTCCCACAAAAAGCTGGTTTGAAAAGATGTGGCAAAAGTTGCAGGCTAAGATGGCTTAACTATCTCAGACCCAACATTAAGCATGGTCACTTCTCTGATGATGAAGATAGAATCATCTGCAACCTCTTTGCTAGCTTTGGAAGCAGGTGGTCGATAATTGCAGCTCATTTACCTGGGAGGACCGACAATGATATCAAGAATTATTGGAACACCAAGCTTAAGAAGAAAATGGTGCATATGAATCCTTCATCAGTTCAGGATAATAAGCCTCATCAGCATCAGCAACACCATCACCACCACCACCAGTCTAGCCTTTTAGCCATTCTTCAAAATTCCACATCAGCTTCACCATTATCATTCTCAGGCAGCACCAACTCTGGCTACAACCATTCTAATGTGTCACTCACAGGCACTTCCAATCTTTTGAGTGGTAAAGCTTCTGCTTGTACTAGCTTCAATTTTCAACCCCGGTTTAGTACTTTGATGGGACCCTTTGAGAATCAGCCAGTGTCTATGGTTGGTGGTGAGGCTGCTAGTTGCAGTTCTTCTGATGGGAGCTGCAATAAGAACCAGATCACTCATATCAAAGAAGCAGAGTTTGTGCACGGAAAGGATGGAACCTTAACCCAACAAGTTGGTGGTGCGCATAACTTTTATCTCAACAATGGATTGTGGGGAGAGAGTTTATTAGATTTTGGAATGGAAGATATTAAACAATTATCAAGCACAGATGGTTGCAGCAACTTGTATTTTTAA 876 0.4247 MGRAPCCDKANVKKGPWSPEEDAKLKEYIQKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGHFSDDEDRIICNLFASFGSRWSIIAAHLPGRTDNDIKNYWNTKLKKKMVHMNPSSVQDNKPHQHQQHHHHHHQSSLLAILQNSTSASPLSFSGSTNSGYNHSNVSLTGTSNLLSGKASACTSFNFQPRFSTLMGPFENQPVSMVGGEAASCSSSDGSCNKNQITHIKEAEFVHGKDGTLTQQVGGAHNFYLNNGLWGESLLDFGMEDIKQLSSTDGCSNLYF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2214 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mibi06g2214 291 MobiDBLite consensus disorder prediction 121 145 - -
Mibi06g2214 291 CDD SANT 71 113 IPR001005 -
Mibi06g2214 291 FunFam Transcription factor RAX3 7 68 - -
Mibi06g2214 291 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mibi06g2214 291 CDD SANT 16 62 IPR001005 -
Mibi06g2214 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mibi06g2214 291 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mibi06g2214 291 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mibi06g2214 291 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mibi06g2214 291 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mibi06g2214 291 Gene3D - 7 68 - -
Mibi06g2214 291 Gene3D - 69 141 - -
Mibi06g2214 291 PANTHER OS09G0431300 PROTEIN 1 238 - -
Mibi06g2214 291 SMART sant 13 64 IPR001005 -
Mibi06g2214 291 SMART sant 67 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2214 Mibi-ChrMibi06 42594814 42595878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2214 1 133 MYB Transcription Factor Family AT5G65790 76.692 1.31e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi06g2214 Myb_DNA-binding 5.8e-15 CL0123