Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2187 ATGGATCGTGAATGGGGTTCGAAGCCTGGGAGTGGAGGCGCCGCCTCCGCCCAGAACGAAGCCATCGACCGTCGTGAGCGTCTCCGCCGTCTTGCCCTCGAGACCATCGATCTTGCCAAAGACCCTTATTTCATGCGCAATCATCTTGGCAGCTATGAGTGCAAGCTCTGCCTCACTCTGCATAATAATGAAGGGAATTATCTGGCGCACACTCAGGGTAAGCGCCATCAGACCAATTTGGCTAAGAGAGCCGCTCGCGAGGCCAAAGAGGCACCCGCTCAACCTCAGCCCCACAAGCGTAAAGTCTCCGTTCGCAAGACAGTGAAGATCGGTAGACCTGGGTACCGAGTGACCAAGCAGTATGATCCAGAGACAAATCAGAGATCTCTTCTTTTCCAGATTGAATATCCTGAGATTGAAGACCTAACAAAGCCGAGGCATCGATTTATGTCTTCTTATGAGCAGAGAGTGCAATCCTTTGATAAAAGATATCAGTATCTTTTGTGCGCAGCCGAACCATATGAAACCATTGCTTTCAAGGTTCCCAGCACAGAGATTGATAAGTCAACTCCAAAGTTTTTCTCACACTGGGACCCAGACACAAAGATGTTTACGTTGCAACTGTATTTCAAACCGAAGCCACCTGAGGCAAACAAACCCCAGCCTCCCTCAACGGCCAATAGCACTGCTGCACCTGGTGTTCCTCCACCACCTCAAGCTCCACCACCTCCTCCTCCACCGCCCCAAGGCTTACCACCTGGCGCCCCTCCGGGAAATCCTCCCAGAGCCCCTCCACCTCCAATGCCCGGATCATTGCCGCCGCCACCTCCTATGTCAAATGGCCCTAGATCTGTACCTCCTGTTGGCAGCAGCACAACAGCAAGTTTCAACATGGGCGCTAGGCCTCCATCTATGCCATCTGGGCAAGGTTTTCCAGGACAACAAATGCAGGGCCAGATTGCTCATCCACCGCCGCCGCCGCCTCCTAGGATGGGGCAGTAG 1002 0.5339 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQYDPETNQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQSFDKRYQYLLCAAEPYETIAFKVPSTEIDKSTPKFFSHWDPDTKMFTLQLYFKPKPPEANKPQPPSTANSTAAPGVPPPPQAPPPPPPPPQGLPPGAPPGNPPRAPPPPMPGSLPPPPPMSNGPRSVPPVGSSTTASFNMGARPPSMPSGQGFPGQQMQGQIAHPPPPPPPRMGQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2187 333 Gene3D Classic Zinc Finger 46 89 - -
Mibi06g2187 333 Gene3D - 93 218 - -
Mibi06g2187 333 MobiDBLite consensus disorder prediction 319 333 - -
Mibi06g2187 333 MobiDBLite consensus disorder prediction 284 316 - -
Mibi06g2187 333 MobiDBLite consensus disorder prediction 229 283 - -
Mibi06g2187 333 SMART CactinC_cactus_3 89 217 - -
Mibi06g2187 333 SUPERFAMILY beta-beta-alpha zinc fingers 48 83 IPR036236 -
Mibi06g2187 333 Pfam Zinc-finger of C2H2 type 52 76 - -
Mibi06g2187 333 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Mibi06g2187 333 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 328 - -
Mibi06g2187 333 MobiDBLite consensus disorder prediction 1 21 - -
Mibi06g2187 333 FunFam Splicing factor 3a subunit 2 94 218 - -
Mibi06g2187 333 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Mibi06g2187 333 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Mibi06g2187 333 MobiDBLite consensus disorder prediction 212 333 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2187 1 227 C2H2 Transcription Factor Family AT2G32600 88.106 7.05e-140 395