Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2174 ATGAAGCAAGACTTCGAATCGCTATCTGTTTCGGGAGACCAATCTCATGATACTTTCGTTCCAACTTCGGCTTCGGAAACTCTATCTGCTTCTCGTACGATGATCAATTCTCGGGTTTGTGAGAATGACGGCTCTAGGATGGTTACAGGTTGTGTGGTGAATGGTTATATTGTTTACACTCGACGAAGGAAGGCTCGGCATTTGTCTGATGGGTCTTCTGAGAATGACAACTTTAAGAGGCTAAAGACTTCTGTAGAATCGCAAGCAAATGTACACATTCCAGAGGCGGAAGGTGGAAGCGGTGTAGAGATAGACAATGTAGAAAATAGAGTAGAAATTGGAGTCAGTTGCAATGTGGGGAATTCTAAAAGCTTCTGTGATGTTCCTGTAGTGATTTCTAACGGTGATGGTTTACAAAAAGGGGGTGTTGTAGGTAAGACATTAAAGTGGTATTCTCGATCAACTTTCAGATCAAAGGCACGCTCTTCTGATATGGGGGCGAGTGTTTTAGAATCTTGCCAGGCTGAAAATGCTAAATCAGATGGGGGGAAGGTGAACGCTGCCCCGAGCGCATTGACAGCTCCAAGAAACAAGTTGGAATTGAAGATGTCGAAAAAGATTGTGCTCAACAAGAAGCCTATGACCGTCAAAGAGCTCTTCGATACCGGTCTACTGGATGGGGTTCCTGTAGTTTACATGGGCGGAAAAAAGGCTTCGGGACTGCGAGGCATTATTAAAGATGGGGGCATATTGTGTTCTTGCTGTTTGTGCAATGGACGCAGGGTTATTCCACCTTCCCAATTTGAGATTCATGCATGCAAAGTGTATAAGCGAGCAGCACAATACATCTGCCTCGAAAATGGGAAGAGCCTGCTTGAGCTATTGAGAGCGTGCAGAGGAGCTCCCTTACACACTCTGGAGGCGACAATTCAAAACGTTGTTTGTTCTCCACCAGATGAAAAGTATTTCACTTGTAAAATGTGCAAGGTATGCTTCCCTCCTTCCTGTGTGGAAAGAGTAGGGTCTATATGCAGTGCTTGCAAGGAGTCTAAGGAATCTCAAGACAGTTCTATTGAAAAAGTGGGCAAAAGAGTCAGGTCTCCTAGACCTCTCTCTGTCTCTAAGCAACCTGATACTTCTGAGAAGTGTATCTCTTCGCAGATTAAGAGGCACTGGAAGAAAAAAACAAAGTCACCAAAATGGGTTAGCCGTGCAAAGTCTTCCAAGAATTCTTCAATGCCTATCCTTCCACGAAAGAAGAGTCTTTGGAAGATGAAAAAGAAGTCCTCCAAATTGTCAGTGAAATTGAAGACTGCAAGAACTACTTCAAATTCAATGCATTTATCTTCACCTAACAAGAGTCACTGGAGGATCACTAAAAAGCACCAGCAGTTGCATAAGTTAGTCTTTGAGGAAGGTGGATTGCCTGATGGAACTGAAGTAGCCTATTATGCACGTGGACAGAAACTGCTTGAGGGCTACAAAAAGGGCTTTGGAATAATGTGTCGATGCTGCAACTCCGAGGTCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCCCGCAAGAAACCTTATGCATACATCTACACATCAAATGGGGTGTCTCTCCATGAGTTAGCTATATCTCTCTCAAAAGATCGCAAGTACTCTGCAAAGGATAATGATGATTTATGCATTATTTGTTGGGATGGCGGAGATTTGTTGCTTTGTGATGGATGCCCAAGGGCTTTTCATAAAGAATGCGCATCCCTGTCGAGTATTCCACGTGGTAATTGGTACTGTAAGTTTTGCCAAAACATGTTTCAAAGAGAAAGGTTTGTGACACACAATGTCAACGCCGTGGCAGCTGGAAGGGTTGAAGGAGTTGATCCTATTGAGCAGATAACCAAGAGATGCGTGCGCATTGTTGAAGATGTTGATGCTGAGCTTAATGGATGTGCTTTATGCAGGGCTTGTGACTTTAGCAAATCAGGGTTTGGTCCGCGAACGATAATAATCTGTGATCAGTGTGATAAAGAATTTCATGTTGGATGCTTGAGGGATCATAAAATGTCGTTTTTGAAGGAATTGCCAGAAGGGGATTGGTTTTGTTGCCATGATTGCTCAACCATACATTCTACTTTTCAGAACCTCCTAGTTAGGGGGGCTGAGAAACTCCCGGAACCTCTATTGGATGTTATAAAGAAGAAGCAAGAGGAAAAAGGTTTAGAATCCCTTAGTGGTGTTGATGTGAAATGGAGGCTTCTTAAGGGCAAAATTGCTTCTCCTGAAACTAGGCCATTTCTTTTGCAAGCTGTCTCAATATTTCATGAATGCTTTGATCCTATAGTTGACTCAGTTACAGGACGCAATCTTATTACGGCCATGATATATGGAAGGACTGTGCGGAGACAAGAGTTTGGGGCAATGCATTGTGCAATTTTGATTGTCAATTCAACTGTGGTATCCGCTGCCTTGCTTCGGATTTTTGGCAGTGATCTTGCAGAACTCCCTCTAGTGGCAACTCGTAGTGTTAACCATGGAAAGGGGTACTTTCAAATATTATACTCCTGCATTGAGAAACTGCTGGCTTCTTTAAACGTAAAGAACCTTGTGTTGCCAGCTACCGCTACTGCAGAGTCCATTTGGACTGAGAAATTTGGGTTCATTAAGATGACACCAGATGAGCTTAGCAACTACAGAAAAAGCTACCAGCAAATGGTGCTATTTCAAGGGACGTCTATGCTTCATAAAATGCTCACCCCTTGTCCTGATGCCAAAAGCTCATCATGA 2778 0.4352 MKQDFESLSVSGDQSHDTFVPTSASETLSASRTMINSRVCENDGSRMVTGCVVNGYIVYTRRRKARHLSDGSSENDNFKRLKTSVESQANVHIPEAEGGSGVEIDNVENRVEIGVSCNVGNSKSFCDVPVVISNGDGLQKGGVVGKTLKWYSRSTFRSKARSSDMGASVLESCQAENAKSDGGKVNAAPSALTAPRNKLELKMSKKIVLNKKPMTVKELFDTGLLDGVPVVYMGGKKASGLRGIIKDGGILCSCCLCNGRRVIPPSQFEIHACKVYKRAAQYICLENGKSLLELLRACRGAPLHTLEATIQNVVCSPPDEKYFTCKMCKVCFPPSCVERVGSICSACKESKESQDSSIEKVGKRVRSPRPLSVSKQPDTSEKCISSQIKRHWKKKTKSPKWVSRAKSSKNSSMPILPRKKSLWKMKKKSSKLSVKLKTARTTSNSMHLSSPNKSHWRITKKHQQLHKLVFEEGGLPDGTEVAYYARGQKLLEGYKKGFGIMCRCCNSEVSPSQFEVHAGWASRKKPYAYIYTSNGVSLHELAISLSKDRKYSAKDNDDLCIICWDGGDLLLCDGCPRAFHKECASLSSIPRGNWYCKFCQNMFQRERFVTHNVNAVAAGRVEGVDPIEQITKRCVRIVEDVDAELNGCALCRACDFSKSGFGPRTIIICDQCDKEFHVGCLRDHKMSFLKELPEGDWFCCHDCSTIHSTFQNLLVRGAEKLPEPLLDVIKKKQEEKGLESLSGVDVKWRLLKGKIASPETRPFLLQAVSIFHECFDPIVDSVTGRNLITAMIYGRTVRRQEFGAMHCAILIVNSTVVSAALLRIFGSDLAELPLVATRSVNHGKGYFQILYSCIEKLLASLNVKNLVLPATATAESIWTEKFGFIKMTPDELSNYRKSYQQMVLFQGTSMLHKMLTPCPDAKSSS 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2174 925 ProSitePatterns Zinc finger PHD-type signature. 560 599 IPR019786 -
Mibi06g2174 925 Pfam PHD-finger 560 601 IPR019787 -
Mibi06g2174 925 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 646 706 IPR013083 -
Mibi06g2174 925 PANTHER AUTOIMMUNE REGULATOR 146 914 - -
Mibi06g2174 925 MobiDBLite consensus disorder prediction 1 27 - -
Mibi06g2174 925 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 546 623 - -
Mibi06g2174 925 MobiDBLite consensus disorder prediction 395 414 - -
Mibi06g2174 925 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 803 891 IPR016181 -
Mibi06g2174 925 Gene3D - 753 914 - -
Mibi06g2174 925 ProSiteProfiles Zinc finger PHD-type profile. 648 706 IPR019787 -
Mibi06g2174 925 MobiDBLite consensus disorder prediction 358 386 - -
Mibi06g2174 925 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 545 634 IPR013083 -
Mibi06g2174 925 CDD PHD1_AIRE 559 599 - -
Mibi06g2174 925 SMART PHD_3 650 704 IPR001965 -
Mibi06g2174 925 SMART PHD_3 559 600 IPR001965 -
Mibi06g2174 925 SUPERFAMILY FYVE/PHD zinc finger 641 703 IPR011011 -
Mibi06g2174 925 Pfam Tify domain binding domain 493 543 IPR032308 -
Mibi06g2174 925 Pfam Tify domain binding domain 243 298 IPR032308 -
Mibi06g2174 925 SUPERFAMILY FYVE/PHD zinc finger 546 601 IPR011011 -
Mibi06g2174 925 ProSiteProfiles Zinc finger PHD-type profile. 557 602 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2174 Mibi-ChrMibi06 42226977 42234166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2174 40 913 PHD Transcription Factor Family AT2G36720 44.964 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mibi06g2174 TDBD 2.8e-13 No_clan