Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2163 ATGATCACTGAACCGAAAATAAGTTCGACTTTCCCATTTAGCTTTGTCTTCCTCCTTTTCTTTTTCCTTAGTCATCATTGTACATGTCAAAAGACTTGCCCAAACTGCGGCTCCTTACAAATTCCATACCCTTTAAGCACAGACCCTGGCTGTGGTGATCCATCCTATAGCCTTCACTGTGATCCGAAATCTAAAAAGCTCTACTTTATCACCCTCAATGGAAGTTCCTATTCCGTTCTCAGAATTATGTCTTCGGTCCAACGCTTGGTGGTGCAGCCCTCACCTTGGCTTTCTAGTTCATGTGTTACTCAAGACATGCCTGTAAGTGGTGGCCTCTGGTTAAACCAGTCACTTCCTTTCAAAATAACTTCATCCAACACAGTCTTCCTCTTTAACTGCTCACCTCGCCTGTTAGTTTCTCCACTCAATTGCACTTCTTCTAGTCTTTGCCACCGTTATTTGGAGAGCTCAGGACATGTTGACAGTAAAAGAGCTTTTCAGTGTGCCAGTGGTCTTGGCCCTTGTTGCACCTTTGTTGCAGGTGGGACGCCTTCAGCATTCAAGATACGCCTTCACAGCTCTGGCTGTAAGGCATTCAGAAGCATCCTTCATTTAGATGCAGAGAAGCCTGCTTATCAGTGGGAGGAAGGCCTTGAGATTCAATGGGCTTCTCCTCCTGAACCTCTCTGCAGGGCTCAACAAGATTGCTCTGGAGCTTCTATCTGTTCCCCAGCCGAAAAAAATGGCGTCTACCGCTGTCTTTGTAAGGCAGAATACCATTGGGACCCTATGGCTGCAAATTGCTTGAAGAACAAGAATAAATCTAAATCACATGTCAGCTTGACAGTCTCAATTGTGGTTGCAACATTTTTTTGTCTAGCCACAGTTATGGCCTTCATCATAAGGAGGTCCTGGAAGCTCTCTTATGGGTCAAAGCAGGCCAAGACAATAGAAGAGGTGATCAAATCAAATTCTGGGGAGACACCTGCTAGGATATTTAAACTGAAGGAGGTGATGAACATAACAAATGGATTTTCTAAAGACAGAATTTTGGGGAATGGTGGCTTTGGGGAAGTCTACAGAGGTGAACTTAAAGATGGGACAGTTGTGGCTGTGAAGAAAGCTAGACTAGGCAACCTCAAAAGCACCCAACAGATATTAAACGAGGTTGCAATTCTTTCTCAAGTCAATCACAAGAACTTGGTCAAACTCCTAGGTTGCTGTATAGATTCTGAGCAGCCTCTGATGATCTATGAGTACATCTCAAACGGGACCCTCCATGACCATCTTCATGGTAAATATTCCAACTTCCTAGACTGGAAAACGAGGTTGAAGGTAGCTTTTCAAACTGCTGAAGCGTTGGCATATCTTCATTCTGCTGCACATACTCCCATTTACCATAGAGATGTGAAGTCCACAAACATACTGCTAGATGATGAATTCAACGCCAAAGTTGCAGATTTTGGGCTCTCCAGATTGGCTAACCCAGGACTTAGTCATGTATCAACCTGTGCTCAAGGAACATTAGGCTACTTGGATCCTGAGTATTACCGTAACTACCAGTTAACTGATAAAAGTGATGTTTATAGTTATGGGGTTGTGTTGCTAGAGCTTTTGACCTCCCAAAAGGCCATAGATTTCTCAAGAGAGCAAGATGATGTAAACCTAGCAATTTTTGTTAGTCAACATGCCAGAAACGGGTCAATCATGGAACTGGTAGATCAGAGGCTCTTGATTCCTAAGGAACCATCTGATGATAAAGTGAAAACAAGCATACAACTTTTCTCAGAGCTAGCACTCAGCTGCTTGAGGGAGAAGAAAAGCGAAAGGCCAAGTATGACGGACATTGTTCAAAACCTTCAATGCATCATTACAATTGTAGATCATGTGAGGAATAGTGATGAGGTATCTGTTTAA 1917 0.4324 MITEPKISSTFPFSFVFLLFFFLSHHCTCQKTCPNCGSLQIPYPLSTDPGCGDPSYSLHCDPKSKKLYFITLNGSSYSVLRIMSSVQRLVVQPSPWLSSSCVTQDMPVSGGLWLNQSLPFKITSSNTVFLFNCSPRLLVSPLNCTSSSLCHRYLESSGHVDSKRAFQCASGLGPCCTFVAGGTPSAFKIRLHSSGCKAFRSILHLDAEKPAYQWEEGLEIQWASPPEPLCRAQQDCSGASICSPAEKNGVYRCLCKAEYHWDPMAANCLKNKNKSKSHVSLTVSIVVATFFCLATVMAFIIRRSWKLSYGSKQAKTIEEVIKSNSGETPARIFKLKEVMNITNGFSKDRILGNGGFGEVYRGELKDGTVVAVKKARLGNLKSTQQILNEVAILSQVNHKNLVKLLGCCIDSEQPLMIYEYISNGTLHDHLHGKYSNFLDWKTRLKVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDEFNAKVADFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSREQDDVNLAIFVSQHARNGSIMELVDQRLLIPKEPSDDKVKTSIQLFSELALSCLREKKSERPSMTDIVQNLQCIITIVDHVRNSDEVSV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2163 638 Gene3D Transferase(Phosphotransferase) domain 1 421 635 - -
Mibi06g2163 638 SMART serkin_6 345 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2163 638 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 318 420 - -
Mibi06g2163 638 CDD STKc_IRAK 351 621 - -
Mibi06g2163 638 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Mibi06g2163 638 FunFam Wall-associated receptor kinase-like 20 421 633 - -
Mibi06g2163 638 Pfam Wall-associated receptor kinase galacturonan-binding 29 90 IPR025287 GO:0030247
Mibi06g2163 638 Pfam Protein kinase domain 346 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2163 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Mibi06g2163 638 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 14 623 IPR044652 GO:0004672
Mibi06g2163 638 ProSiteProfiles Protein kinase domain profile. 345 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2163 638 SUPERFAMILY Protein kinase-like (PK-like) 322 620 IPR011009 -
Mibi06g2163 638 Gene3D Phosphorylase Kinase; domain 1 315 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2163 Mibi-ChrMibi06 42095916 42097832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2163 33 629 Receptor kinase-like Gene Family AT5G02070 45.760 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi06g2163 Pkinase 5.9e-50 CL0016