Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2148 ATGGAAGAAAAAGACATCCACGTTTTCGGGTCAGCCGGAAACTCAGACTCCGGCCAGCCTCTGCAACCCGTCGGAGTATCCGTACCTCCGGTGACAAACATGACAATGAATATGAACTTTCAGAATAGTGGAGGCGTAACAGTTGGAGATGCAGGAACAATGACATCGCCTGCAAGTACTGGAGGAAGAGGGCAAGGGAGTTTAGATTTGTTTGGGAAAAAGAAAAGAGGGAGGCCAAGAAAATATGATTCAGATGGGAAGCCGAGAGTGACGACGTCGTATCAGGGTGCACCATCACAACAAGGCTTTTCTTTGTCTCCAACCTCACCTTCTGAATTCTCTCCCAAAAGGGGTCGAGGAAGACCACCTGGTTCTGGCAACTGGAAGCTCCTTGCTTCTTTAGGCGAGATGTTTGCAAACACAGCAGGTGGGGATTTTACACCTCATGTCGTCACTGTTCATACTGGAGAGGATGTTGCCGGAAAAATCCTGTCTTTTGCTCAGAAAGGTACTAGAGGAGTTTGCGTTCTTTCGGCCAATGGAGCTATATCTAATGTCACTCTACGGCAGCCTGGTTCTTCCGGTGGCTTGTTAACATACGAGGGCCGGTTCGAGATTTTGTCTCTGTCAGGGTCATTCACAGTTTCTGATAACGGAGGCTTAAAAAGTCGAAGTGGTGGGTTGAGTGTCTCTCTGGCTGGCCCTGATGGTCGTGTGATAGGCGGTGGTGTTGCTGGTCTCTTGACTGCTGCTAGCCCAATCCAAATTGTGATGGGAAGCTTCATGCCGTATAGTAACAAGGCACAGAAAAGAAAGCAACATAGAGAGAACACTGTGGCATCTCCAGTTTCTGGTGTAGATGCCGTGATGGCGGCAAGACCGATCTCCCAGGCGAATCCTGAGGGTGGTGAGAACTGTTTCACATCCATGGCCCAGCAGCATCAGCTTCCAGAACAAAGTCAAAGAGAATCAGACAACATTACAGGCAGTGATAAACAGAGTTTAGCTTCTGATTGGAATGGATTTGAAGAGTTGTCTGATCAGGGTCCAACCCCAGACATCAATATATCTTTGCCTGGGGAATAG 1086 0.4843 MEEKDIHVFGSAGNSDSGQPLQPVGVSVPPVTNMTMNMNFQNSGGVTVGDAGTMTSPASTGGRGQGSLDLFGKKKRGRPRKYDSDGKPRVTTSYQGAPSQQGFSLSPTSPSEFSPKRGRGRPPGSGNWKLLASLGEMFANTAGGDFTPHVVTVHTGEDVAGKILSFAQKGTRGVCVLSANGAISNVTLRQPGSSGGLLTYEGRFEILSLSGSFTVSDNGGLKSRSGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVMGSFMPYSNKAQKRKQHRENTVASPVSGVDAVMAARPISQANPEGGENCFTSMAQQHQLPEQSQRESDNITGSDKQSLASDWNGFEELSDQGPTPDINISLPGE 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2148 361 MobiDBLite consensus disorder prediction 313 361 - -
Mibi06g2148 361 ProSiteProfiles PPC domain profile profile. 143 282 IPR005175 -
Mibi06g2148 361 MobiDBLite consensus disorder prediction 12 63 - -
Mibi06g2148 361 MobiDBLite consensus disorder prediction 313 341 - -
Mibi06g2148 361 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 36 323 IPR039605 GO:0003680
Mibi06g2148 361 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 269 - -
Mibi06g2148 361 SMART AT_hook_2 73 85 IPR017956 GO:0003677
Mibi06g2148 361 SMART AT_hook_2 116 128 IPR017956 GO:0003677
Mibi06g2148 361 Pfam Plants and Prokaryotes Conserved (PCC) domain 148 261 IPR005175 -
Mibi06g2148 361 MobiDBLite consensus disorder prediction 69 87 - -
Mibi06g2148 361 CDD DUF296 147 261 IPR005175 -
Mibi06g2148 361 MobiDBLite consensus disorder prediction 88 113 - -
Mibi06g2148 361 PRINTS AT-hook-like domain signature 73 83 IPR017956 GO:0003677
Mibi06g2148 361 PRINTS AT-hook-like domain signature 114 125 IPR017956 GO:0003677
Mibi06g2148 361 Gene3D - 148 281 - -
Mibi06g2148 361 Pfam AT hook motif 73 84 IPR017956 GO:0003677
Mibi06g2148 361 Pfam AT hook motif 116 125 IPR017956 GO:0003677
Mibi06g2148 361 MobiDBLite consensus disorder prediction 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2148 Mibi-ChrMibi06 41941197 41943766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2148 73 298 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 53.165 2.65e-66 212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2148 06 41941197 41943766 Mibi06g2148 06 41941197 41943766 ECH