Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2145 ATGGAAATGCCTGCCAGAAGATCCAACTACACCCTCCTCAACCAAATCCCTGATGACGATTTCGGTGGCAGTTCTGCCTTGTCCGCCGCCACCACTGCTCCCACTTTATTCGATTCTTCATCTGGAGACGGCAAGAACAATAAAGGCAAGTTCGACAGAGGATATGATTGGGACTTGGTTGCTGATCATAGGCTTCCTCAACAGCAGGGAAATCGGATCGCTAATTTATACTCTTCGATCGGCTTGCAGAGGCAGTCTAGTGGTAGCAGTTTTGGTGAAAGCTCCTTGTCCGGAGAGTATTTTGCTCCAACTCTGTCCGTGGCAGCTACGAATGAGATTGATACATTTGGTTATATGCATGACGATGGCTTCAAGGTTGGCGGCGCTGTTGTTGGAGGCGAGCTACGGAACAAGTTTGTGGAGGCTGCGGTAATGATGGGAGGGTCGTCGTCTGGTAAAAGCTGGGCGCAACAGACGGAGGAAAGCTATCAGTTGCAGCAGGCTTTGGCTCTTAGAGTTTCATCTGAGGCAACATGTGCTGATGATCCTAATTTTCTGGATCCCTTACCGGATGAGTCTACTTTAAGGTCGTCATCGTCAAATTCGGCGGAGGCAGTGTCTCATCGATTCTGGGTCAATGGTTGCCTATCTTACTCTGACAAGATTCCAGATGGCTTCTACCTTGTCCACGGGATGGATCCCTATGTGTGGACTGTGTGTACTGATCTACAGGAAAATGGCCGAATTCCATCGATTGAATCATTAAAGTCTGTAGATCCCTGCTATGACTCTTCACTTGAAGTAGTTTTGGTGGATCAACGTAGTGATCATAGCTTAAAGGAGCTGCAAAACAGAGTGCGTAGCATTTCTAGTAGCTGCATAACTACAGAAGAGGTTGTAGACCATCTTGCTAAGTTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTTATTTCCATCTGGAGGGCGTGCAGTAATGATCTAAAACAGTGCTTGGGATCTGTTGTTGTTCCTTTAGGTAGTCTATCTGTTGGCCTTTGCAGGCATCGTGCTATACTGTTCAAAGTGCTAGCTGACACCATTGATTTGCCCTGTCGAGTTGCTAAGGGCTGTAAATATTGTTCAAGAGATCATGCTTCCTCTTGTCTTGTCCAATTTGGGCTTGAAAGGGAATATCTTGTTGATTTAATTGGGAAGCCGGGTTATTTATGCGAGCCTGATTCCTTGCTCAACGGTCCATCCTCCATCTCATTTTCTTCACCCTTGAGCTTTCCAAGACTTAAACCGGCTGAACCTACCATTGATTTCAGGTCATTGGCCAAAGAGTATTTTTCAGATTGTGTGTCTCTTGAGCTTGTCTTTGACAATGATTCTGCAGAACAATTTGATGGGAAGGGCAGAGGCAGAAATAATGTTAGGTCAGATTCAAATGATAGCAACAAAACTCCTCGCCAGTCTCTGCATTCAGAAGTTTCTCATTTAAGAACTCAAGATCAGGGTTCTGAGACATTTGAATCATGCAACAATTCTCCTCAGAATGTAGACCCTACACCCATGGGCAGGGATCTACTGCCTACTGCTATAACGCTGACGAAGTCAAATGTTGACGCTACTGATGGTAGGAGGTTTGCTGAAGGAAGTCAACTGGTTGCTAGCAAACCCAGTAGAGAGCTTGGCCATGATATCGAGGATTTTGACATAAATTGGAGTGATCTTGTTTTAAAAGAGAGAATAGGATCGGGTTCTTTTGGAACAGTACATCGAGCTGAGTGGAATGGCTCGGATGTTGCTGTTAAAATTTTAATGGAACAAGATTTTCATGCCGAAAGATTCAAGGAGTTTCTAAGAGAGGTTGCAATAATGAAACGCTTGCGGCATCCAAATATTGTTTTATTTATGGGCGCAGTTACTCAGCCTCCAAACTTATCAATTGTCACGGAATACCTATCTAGGGGAAGCTTATACAGGCTGTTACACAAACCTGGTGCCAGAGAAATGTTGGATGAGAGACGTAGACTTAGTATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCACAGACGCAATCCTCCCATTGTTCATAGAGATCTGAAGTCTCCAAACCTTCTTGTAGACAAGAAATATACTGTGAAGGTTTGTGATTTTGGCCTTTCACGTCTCAAGGCTAATACATTTCTCTCGTCCAAGTCTGCTGCTGGGACTCCCGAGTGGATGGCCCCAGAAGTTCTACGAGATGAGCCATCCAATGAGAAGTCAGATGTTTATAGTTTTGGTGTAATCTTGTGGGAGATGACGACAATGCAACAGCCATGGAGTAATTTGAATCCTGCACAGGTTGTGGCAGCTGTTGGTTTTAAGGGCAAAAGGCTTGAGATTCCACGCGATTTGAATCCTCAAATAGCTGCGATAATTGAGGCTTGCTGGGCTAACGAGCCCTGGAAACGTCCTTCCTTTTCAAGTATAATGGATTCTTTAAGATCATTGATCAAACCTCCGGCACCTCAACCCGCACCTCAACCCATACGTCCAAACATACCCTTACTTACCTGA 2568 0.4494 MEMPARRSNYTLLNQIPDDDFGGSSALSAATTAPTLFDSSSGDGKNNKGKFDRGYDWDLVADHRLPQQQGNRIANLYSSIGLQRQSSGSSFGESSLSGEYFAPTLSVAATNEIDTFGYMHDDGFKVGGAVVGGELRNKFVEAAVMMGGSSSGKSWAQQTEESYQLQQALALRVSSEATCADDPNFLDPLPDESTLRSSSSNSAEAVSHRFWVNGCLSYSDKIPDGFYLVHGMDPYVWTVCTDLQENGRIPSIESLKSVDPCYDSSLEVVLVDQRSDHSLKELQNRVRSISSSCITTEEVVDHLAKLVCNRMGGSASVGEDDFISIWRACSNDLKQCLGSVVVPLGSLSVGLCRHRAILFKVLADTIDLPCRVAKGCKYCSRDHASSCLVQFGLEREYLVDLIGKPGYLCEPDSLLNGPSSISFSSPLSFPRLKPAEPTIDFRSLAKEYFSDCVSLELVFDNDSAEQFDGKGRGRNNVRSDSNDSNKTPRQSLHSEVSHLRTQDQGSETFESCNNSPQNVDPTPMGRDLLPTAITLTKSNVDATDGRRFAEGSQLVASKPSRELGHDIEDFDINWSDLVLKERIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAREMLDERRRLSMAYDVAKGMNYLHRRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEMTTMQQPWSNLNPAQVVAAVGFKGKRLEIPRDLNPQIAAIIEACWANEPWKRPSFSSIMDSLRSLIKPPAPQPAPQPIRPNIPLLT 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2145 855 Pfam Ethylene-responsive protein kinase Le-CTR1 203 409 - -
Mibi06g2145 855 SUPERFAMILY Protein kinase-like (PK-like) 566 830 IPR011009 -
Mibi06g2145 855 FunFam Serine/threonine-protein kinase isoform 1 568 655 - -
Mibi06g2145 855 PRINTS Tyrosine kinase catalytic domain signature 692 710 IPR001245 GO:0004672|GO:0006468
Mibi06g2145 855 PRINTS Tyrosine kinase catalytic domain signature 739 749 IPR001245 GO:0004672|GO:0006468
Mibi06g2145 855 PRINTS Tyrosine kinase catalytic domain signature 802 824 IPR001245 GO:0004672|GO:0006468
Mibi06g2145 855 PRINTS Tyrosine kinase catalytic domain signature 651 664 IPR001245 GO:0004672|GO:0006468
Mibi06g2145 855 PRINTS Tyrosine kinase catalytic domain signature 758 780 IPR001245 GO:0004672|GO:0006468
Mibi06g2145 855 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 187 834 - -
Mibi06g2145 855 MobiDBLite consensus disorder prediction 466 525 - -
Mibi06g2145 855 Gene3D Transferase(Phosphotransferase) domain 1 656 840 - -
Mibi06g2145 855 CDD STKc_MAP3K-like 583 831 - -
Mibi06g2145 855 Gene3D Phosphorylase Kinase; domain 1 570 655 - -
Mibi06g2145 855 Pfam Protein tyrosine and serine/threonine kinase 578 831 IPR001245 GO:0004672|GO:0006468
Mibi06g2145 855 MobiDBLite consensus disorder prediction 480 521 - -
Mibi06g2145 855 FunFam Serine/threonine-protein kinase CTR1 656 841 - -
Mibi06g2145 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Mibi06g2145 855 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524
Mibi06g2145 855 SMART serkin_6 577 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2145 855 ProSiteProfiles Protein kinase domain profile. 577 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2145 Mibi-ChrMibi06 41897925 41906419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2145 1 842 MAP Kinase Kinase Kinase AT5G03730 66.204 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mibi06g2145 PK_Tyr_Ser-Thr 8.1e-72 CL0016