Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2142 ATGGACGACATGGATGATCATCATCACCATCACCATCAACAGCATCAAAATCTGGAATTTACTACTATGAGTGATCTCCGCCACCTCATGAGTGCACCGGCGAGGTCTCTCCCAGCTGAAGTACTCTTCCCCAATTTCACTCCTTATGACCCCAGCTTGTCCTTCCCTCGTACTCACCACCAACTCATGCCTTCAGATATTATGCCTCTCACTAATACTTCCATTTCTGTGGCCACCACTCCTTCCTCCTCCGCCGCCGCCACTTCTTCTCTTGGTGGCTTTGACGCTGACACTTCTGGCTGTTGCTTCCCCGGAGAGGCCTCCACCGCACGATGGCCAAGACAGGAGACTCTTACACTCCTTGAGATCAGATCTCGTCTTGACTCCAAGTTTAGGCTCTCCAATCAGAAGGGTCCCTTGTGGGATGAACTTTCTAGAATCATGGCCGAAGAATATGGATATCAAAGGAGCGGCAAAAAATGCAGGGAAAAATTTGAAAACCTGTACAAATATTACAAGAAAACAAAGGAGGGTAAAGCGGGAAGACAGGATGGGAAGCATTACAGATTCTTCCGCCAACTTGAAGCCTTATATGGAGAAAACACAAACCCAACCTCAGCCCAAGAAACCAATTTCGGTAGCAACACTGGTCTCCATCACTTTCATACACCCTCCCAAACAAACCAAGACATCATTTTTAACAGGCCCAGTGATAGTGTTAGCCTCACTAACAACTCCACTGATGAGCTGGACACATCATCATCGGATGAAAATGATTCCATGGAGAAGAGGCGAAAGAGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGGAGCTGGAAGGTGAAGATAAAAGAGCTGATAGATGCAGAGATGAAGAAGGTGATGGAGAAGCAAGAGGCATGGTTGGAGAGGTTAATGATGACATTGGAAGAGAAGGAAAAGGAGAGGGCTTTGAGAGAGGAAGAATGGAGCAGACAAGAAGCAGCCAGGATAGATAAGGAGCATAAGTTTTGGGCTAAAGAGAGGGCATGGATTGAAGCCAGAGATGCAGCTTTAATGGAGGCATTACAGAAAATAACAGGAAGAGAAATAATAATAAAGGCTGGTGATCATCCAACTAGTGCTGATGTTCAAAATAATTACAGCGAAAACCAGAACGAAGATGGGAGTGAAATATTGCATAGCACTGACAGAGTTGGTGAGAGTTGGACAGAAAGTGAGATCACAAATATGGTTCAGGTGAGAGCTGAGGTGGAATCCAGGTTTGGGAAAACTGGGTGTCCGGAGGAGGTTTTGTGGGAGGAAGTTGCTAACAAAATGGCTTGTTTTGGATACCATAAGGCTGCTTCCGTGTGCAAAGACAAGTGGGAGAGTATCAGAAGATATCACAAGATGAAGCTAAGGCAACATAATTCAGCTACTTTTTACTTGGAAACCAATGATAATAATAATAATCAGTCGTCATCCCTATATAATCATCATCATCAAGGAAGTGTTTATTGTGATGTGGTCAACCAACAGCGTCAGGATGGCTCTTCACCTTCAAATTCTAACGTTGGAAATAATGCTACTGCTAGGGCTGATGGTTGTTTTCCCTTGTTTATGTGTGAGGGAGAAAATATGTGGGAAAATTTCGGCTTAAAGTTCAACAAAGGAAACCAAAACCCAAGGGAGTTATATTGCAAGGCCAAGAAGCTTCCCTTAAATGTTAGATCAGAGACATGCATTATATCTCATCACATTCTGGTACCAAAAGTATTGTCTGATTCAAACCCAACTTATAAAATAACAATCCTTTTCCATGCCAAACAGCAAAATTTAAAACTGCGGGGAAATTGCAACCTAGGGGAATTATAA 1875 0.4411 MDDMDDHHHHHHQQHQNLEFTTMSDLRHLMSAPARSLPAEVLFPNFTPYDPSLSFPRTHHQLMPSDIMPLTNTSISVATTPSSSAAATSSLGGFDADTSGCCFPGEASTARWPRQETLTLLEIRSRLDSKFRLSNQKGPLWDELSRIMAEEYGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENTNPTSAQETNFGSNTGLHHFHTPSQTNQDIIFNRPSDSVSLTNNSTDELDTSSSDENDSMEKRRKRRGGGGGGGGGGGGGGRSWKVKIKELIDAEMKKVMEKQEAWLERLMMTLEEKEKERALREEEWSRQEAARIDKEHKFWAKERAWIEARDAALMEALQKITGREIIIKAGDHPTSADVQNNYSENQNEDGSEILHSTDRVGESWTESEITNMVQVRAEVESRFGKTGCPEEVLWEEVANKMACFGYHKAASVCKDKWESIRRYHKMKLRQHNSATFYLETNDNNNNQSSSLYNHHHQGSVYCDVVNQQRQDGSSPSNSNVGNNATARADGCFPLFMCEGENMWENFGLKFNKGNQNPRELYCKAKKLPLNVRSETCIISHHILVPKVLSDSNPTYKITILFHAKQQNLKLRGNCNLGEL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2142 624 Coils Coil 301 328 - -
Mibi06g2142 624 MobiDBLite consensus disorder prediction 202 284 - -
Mibi06g2142 624 FunFam trihelix transcription factor PTL-like 112 174 - -
Mibi06g2142 624 ProSiteProfiles Myb-like domain profile. 401 466 IPR001005 -
Mibi06g2142 624 Gene3D - 112 174 - -
Mibi06g2142 624 Gene3D - 409 471 - -
Mibi06g2142 624 MobiDBLite consensus disorder prediction 202 251 - -
Mibi06g2142 624 CDD GT1 409 472 - -
Mibi06g2142 624 FunFam Trihelix transcription factor GT-2 409 471 - -
Mibi06g2142 624 ProSiteProfiles Myb-like domain profile. 111 169 IPR001005 -
Mibi06g2142 624 CDD GT1 111 176 - -
Mibi06g2142 624 Pfam Myb/SANT-like DNA-binding domain 111 197 IPR044822 -
Mibi06g2142 624 Pfam Myb/SANT-like DNA-binding domain 408 475 IPR044822 -
Mibi06g2142 624 PANTHER FI21293P1 62 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2142 Mibi-ChrMibi06 41875212 41882248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2142 23 557 Trihelix Transcription Factor Family AT5G03680 41.625 6.41e-125 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi06g2142 Myb_DNA-bind_4 1.1e-11 CL0123