Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2135 ATGGACTTGTATCTGAAGCAATGGAGGAACCAGGATGAGTCAGTGGCAGAGGAACAACATTCTGCAAAGATGCCAAAACTTGTTCTCCAACCTCATCAAAAGCCTCAATCCTCTGTCTCTGCTCTCCCTCTGTTTGTACCCCAACCCAACACTACTAAAGTCAGCACCTTGTCAGCAGCATTATCTGTTCCTACCTCACCCTCCACCATATTTCCCCGTAAGATTTATATTCCTTCTGACTGGATGGGGAGTTATTTCAGCTTATCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATTTTCCGGTACATGCTAGCCGGCGCAGCTGTGCCTCCTGAGCTTCTTCACCCAATTAAGAAAAGCCTTCTTCAATCCTCTTCCTTTTTCCTCCAACACTACCCACACTATGACCCAGCTCTGGAATTGCAGTCATCAGGGTATTGGGGAAGGGCAGCCATGGATCCAGAGCCTGGGCGGTGCCGGAGGACTGACGGCAAAAAGTGGCGGTGCTCGAGGGATGTGGTTGCCGGCCAGAAGTACTGCGAGCGCCACATGCATCGTGGTCGAAATCGTTCAAGAAAGCCTGTGGAACTTCCCACACGAACCTCTCCCGGTGGCGGCGGAGGAGGATCTGTTTGTGATTCTATACCCATGACTGCGCCGCCCTCACTGAGTTCCCCTTTCGATCTCCATCTCGATCAAAGCTTGACCAGTCCATTATCTTCTAGCTTAATCGCGCTATTGTTCTGGATTCATGGCTTATCCTTGGAGCATTTCATGGACATGCCTGTATCATCCGAATGGAGGTCGTCTCAATTTCGAACAGGCCAGGCTAGAACAAGAAGGCACGCCACTACCTCTGGTAGCGGCCACCACACTCACACTGGGACTCGTCTAATCATGGAAAAATTGTTTGATGCTGCGGGAACTATAATAAAGCTATCAACGTTCAAGAAGGATCACGCTAAAGTATGCAGCTACTCATCTCTTGTAAAGTTGCACCTAGTCATCCTTTTCACCTCAATAGCACGGTATGCATTGCTCGTCTTGAACGACAAGACTATTAAATCCCAAGAAACCATGTACAGTACCCCCCAAATGTAA 1104 0.4909 MDLYLKQWRNQDESVAEEQHSAKMPKLVLQPHQKPQSSVSALPLFVPQPNTTKVSTLSAALSVPTSPSTIFPRKIYIPSDWMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLHPIKKSLLQSSSFFLQHYPHYDPALELQSSGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTRTSPGGGGGGSVCDSIPMTAPPSLSSPFDLHLDQSLTSPLSSSLIALLFWIHGLSLEHFMDMPVSSEWRSSQFRTGQARTRRHATTSGSGHHTHTGTRLIMEKLFDAAGTIIKLSTFKKDHAKVCSYSSLVKLHLVILFTSIARYALLVLNDKTIKSQETMYSTPQM 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2135 367 ProSiteProfiles QLQ domain profile. 85 120 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi06g2135 367 Pfam QLQ 86 118 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi06g2135 367 PANTHER GROWTH-REGULATING FACTOR 5 44 206 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mibi06g2135 367 SMART QLQ_2 84 120 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi06g2135 367 MobiDBLite consensus disorder prediction 187 210 - -
Mibi06g2135 367 ProSiteProfiles WRC domain profile. 154 198 IPR014977 -
Mibi06g2135 367 Pfam WRC 155 197 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2135 Mibi-ChrMibi06 41793010 41795960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2135 1 200 GRF Transcription Factor Family AT2G36400 59.048 6.22e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mibi06g2135 WRC 2.2e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1275 02 12586586 12588612 Mibi06g2135 06 41793010 41795960 CCT
Mibi06g2135 06 41793010 41795960 Mibi06g2135 06 41793010 41795960 ECH