Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2130 ATGACCGCCCAGCTGTTACGCTCTATCCCTCCCGAATCAGCAAGTGTACGTGAGGCTCGTATTTGTCAGTTTTTAAACTATATTCCTCCTGAATCAACAAGTGTTTTTGTCAATACCTTTGTTCCAAAGAGTCAGCTGAAAATGAAGGTGATCGCCGCTTATTTGCTCGCTGTCTTGGGCGGCAACACCTGTCCTTCCTCTTCTGATCTCAAGGGCATTCTTGGATCTGTCGGAGCAGAGGTTGAAGATGACAGGATTGAGCTTCTTTTGTCTGAGGTGAAGGGTAAAGACATAACAGAGCTTATCGCCAGCGGGAGGGAAAAATTGGCTTCTGTGCCTTGTGGCGGCGGTGCCGCCGTCGCAATGGCCGCCGCACCCGGTGGAGCTGGCGGCGCTGCGGCTCCGGCGGCAGCCGAGTCAAAGAAGGAAGAAAAGGTGGAGGAGAAAGAAGAATCTGATGATGACATGGGCTTCAGTCTCTTCGACTAA 489 0.5153 MTAQLLRSIPPESASVREARICQFLNYIPPESTSVFVNTFVPKSQLKMKVIAAYLLAVLGGNTCPSSSDLKGILGSVGAEVEDDRIELLLSEVKGKDITELIASGREKLASVPCGGGAAVAMAAAPGGAGGAAAPAAAESKKEEKVEEKEESDDDMGFSLFD 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2130 162 Hamap 50S ribosomal protein L12 [rpl12]. 49 162 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mibi06g2130 162 MobiDBLite consensus disorder prediction 125 162 - -
Mibi06g2130 162 FunFam 60S acidic ribosomal protein P2 45 106 - -
Mibi06g2130 162 CDD Ribosomal_P2 48 162 IPR044076 GO:0002182|GO:0003735|GO:0022625
Mibi06g2130 162 Pfam 60s Acidic ribosomal protein 65 161 - -
Mibi06g2130 162 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 48 162 IPR044076 GO:0002182|GO:0003735|GO:0022625
Mibi06g2130 162 Gene3D - 47 106 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2130 Mibi-ChrMibi06 41751638 41753597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2130 48 162 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 65.217 1.37e-31 108