Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2089 ATGCAAATCTTCGTCAAAACCCTCACGGGGAAGACCATTACTCTCGAGGTCGAGAGCAGCGACACCATCGACAATGTTAAGGCTAAGATTCAAGACAAGGAAGGCATCCCACCGGATCAGCAACGTTTAATTTTTGCTGGAAAGCAGCTTGAAGATGGCAGGACTTTAGCTGATTACAACATTCAGAAGGAATCCACCCTTCATCTTGTACTGAGGCTTCGTGGTGGCATCATAGAGCCTTCTTTGATGGCTTTGGCTCGTAAATACAATCAAGACAAGATGATCTGCCGCAAAATTGTGCCGTCAACTTCTCTTTTACCTGCTTCTATAGATCAATATTCAACAGGGAACTACAAGTTGAACCCTCTTTTGCTATAA 378 0.4392 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKIVPSTSLLPASIDQYSTGNYKLNPLLL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2089 125 FunFam Predicted protein 78 98 - -
Mibi06g2089 125 SUPERFAMILY Ubiquitin-like 1 76 IPR029071 -
Mibi06g2089 125 ProSitePatterns Ubiquitin domain signature. 27 52 IPR019954 -
Mibi06g2089 125 PANTHER UBIQUITIN 1 87 - -
Mibi06g2089 125 Gene3D - 1 79 - -
Mibi06g2089 125 FunFam Ubiquitin-60S ribosomal L40 fusion 1 78 - -
Mibi06g2089 125 Pfam Ribosomal L40e family 78 98 IPR001975 GO:0003735|GO:0005840|GO:0006412
Mibi06g2089 125 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Mibi06g2089 125 PRINTS Ubiquitin signature 32 52 IPR019956 -
Mibi06g2089 125 PRINTS Ubiquitin signature 53 74 IPR019956 -
Mibi06g2089 125 PRINTS Ubiquitin signature 11 31 IPR019956 -
Mibi06g2089 125 SMART ubq_7 1 72 IPR000626 GO:0005515
Mibi06g2089 125 Gene3D - 80 108 IPR038587 -
Mibi06g2089 125 CDD Ubl_ubiquitin 1 76 - -
Mibi06g2089 125 Pfam Ubiquitin family 3 74 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2089 Mibi-ChrMibi06 41449664 41450672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2089 1 111 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 89.189 6.71e-68 199