Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2078 ATGTTCGAGAAGCCATTAACACCAAGCGACGTGGGGAAGCTAAACAGGCTGGTGATTCCGAAGCAGCACGCAGAGAAGTACTTTCCTTTGGCGGCGGCAGCAGGAGGGGAGGTGGCTGGAGAGAGCAAAGGGGTGTCGCTTAGTTTTGAGGATGAGGAGGGTAAGTGTTGGAGGTTCCGTTACTCTTACTGGAATAGCAGTCAGAGTTATGTGCTCACCAAAGGATGGAGTCGTTACGTCAAAGATAAGCGCCTCGATGCTGGCGACGTCGTTTTGTTCCTCCGCCACCGCACCCACTCCAACCGCCTCTTCATCAACTGGCGCCGCCGCCTCCCCGCCACCAGGGCCGTTCCCTCCTCCGCCACCGACGGGGACAGCAATATGAATAACAATAATGTTGGTGTGGGAGTGGGGTGGACCAGAAGTTTCTATGCTCCACATCCTTATCCTACTCATCATCATCATCAGGCCTTGCCATACCAACCTCACTGTCTTCATGCAGAGGAGCAGAACAAAACGACGTCGCCGGCGGGAAATAACTCCAGCTCCAGGATACTGAGGCTGTTCGGTGTAGACATGGAATGTCAGCCCCAAGATTCCGGACCCCAATGCTCTTACATGTCATCGACGACGTCGTTCCAGGATACAGCAGCCCATCAACACCACCACTTGTACGGCCATTTTACTCCTCAATCTGCTTCTAATTATTCCAGTAATCACATGGTACGTCAACAACCGTAG 741 0.5317 MFEKPLTPSDVGKLNRLVIPKQHAEKYFPLAAAAGGEVAGESKGVSLSFEDEEGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFLRHRTHSNRLFINWRRRLPATRAVPSSATDGDSNMNNNNVGVGVGWTRSFYAPHPYPTHHHHQALPYQPHCLHAEEQNKTTSPAGNNSSSRILRLFGVDMECQPQDSGPQCSYMSSTTSFQDTAAHQHHHLYGHFTPQSASNYSSNHMVRQQP 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2078 246 Pfam B3 DNA binding domain 2 110 IPR003340 GO:0003677
Mibi06g2078 246 ProSiteProfiles B3 DNA-binding domain profile. 2 111 IPR003340 GO:0003677
Mibi06g2078 246 Gene3D - 1 116 IPR015300 -
Mibi06g2078 246 SMART B3_2 2 111 IPR003340 GO:0003677
Mibi06g2078 246 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 208 IPR044800 GO:0003700
Mibi06g2078 246 SUPERFAMILY DNA-binding pseudobarrel domain 1 110 IPR015300 -
Mibi06g2078 246 CDD B3_DNA 1 101 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2078 Mibi-ChrMibi06 41335563 41336887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2078 1 211 RAV Transcription Factor Family AT5G06250 50.233 1.07e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi06g2078 B3 5.4e-29 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1207 02 11930712 11931967 Mibi06g2078 06 41335563 41336887 CCT
Mibi06g2078 06 41335563 41336887 Mibi06g2078 06 41335563 41336887 ECH