Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2072 ATGGGCCGCGTCCGTACTAAGACAGTGAAGAAGTCTTCACGTCAGGTAATCGAGAAGTACTACTCTCGAATGACACTGGATTTCCACACGAACAAGAAGATTCTCGAGGAGGTTGCTCTCATTCCCTCCAAGAGACTCCGCAACAAGATCGCAGGATTCTCCACTCATCTCATGAAGAGGATTCAGAAGGGACCTGTTCGTGGAATTTCCCTCAAGCTTCAGGAAGAAGAGCGTGAGCGTCGCATGGATTTCGTCCCTGATGTCTCTGCCATTAGGACCGATCAGATCGAGGTCGATAAGGAGACTCTGGATATGCTTAGCGCTCTTGGTATGAATGATATTCCTGGCCTCGTTAAAGTTGATCCTGTCCCTGTGCAGCAGACGGTAGGATTTGGTCGCGGTTTTGGCGGAGCTAGGAGCTTTTCGACCATCAGATGGTTAGTCTTAACTTTCAAAGCATTCACTGGTCAAGAACTGCTATTTGATCTTTCGTCATCCAAAATCCAAAACAAGACCTTTCAGTTCTAG 528 0.4754 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIRTDQIEVDKETLDMLSALGMNDIPGLVKVDPVPVQQTVGFGRGFGGARSFSTIRWLVLTFKAFTGQELLFDLSSSKIQNKTFQF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2072 175 PANTHER 40S RIBOSOMAL PROTEIN S17 1 125 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mibi06g2072 175 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mibi06g2072 175 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Mibi06g2072 175 FunFam 40S ribosomal protein S17 1 62 - -
Mibi06g2072 175 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mibi06g2072 175 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mibi06g2072 175 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2072 Mibi-ChrMibi06 41216627 41218431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2072 1 140 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 81.429 6.95e-80 232