Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2059 ATGTCCGCCGGCGTAAGAGCTTCCAACCGTACGGCATCATCGCCGCCGCCTGAGGGTTCTCAGAATCGGCCGCCACCGAAGCGTCATCTAGCCTTCGCATCTACTAAACCGCCGTTTGTTCCTCCCGATGATTACCACAGCTTTTCGTCTCCTAACTCTAGAAGGCCTGCCGATCAAGTACCTGAGGCTGTTGTCGTTCGATCTCCGTACATTAAGCGGAAGAGCATAGTGAATGACAACAATGGAGAGTCCCAGGAATGGAGTAACAGCCCGGCTACAAATGTAATGAGTAGTCCCCTCAAAACACCCGTTTCTGCAAAAGGCGGAAGGACATACAACAAGTCCAAGGTTGTCAAAGAAGGAAAATCTGGTCCTCAGACCCCCATGTCAAATGCTGGTTCCCCTTCTCTAACTCCTGCTGGCAACTGTCGTTATGATAGTTCCTTGGAAAAAAGAATGACAAAATTATGGCATAACATCACAGGTTTGTTGACTAAAAAGTTCATCAATTTGCTTAAGCACGCAGAGGATGGTGATCTTGACCTAAACAAAGCGGCTGAAACTTTGGAGGTGCAAAAGAGGAGGATATATGACATAACCAATGTTTTAGAAGGAATTGGTCTCATTGAGAAAAAGCTCAAGAATAGAATACATTGGAAGGGAATCAAATCTTCTACTTCTGGAGAGGTTGATGGTGATGCATCTATGTTAAAGGCAGATGTTGACCAGCTTTCTCTGGAAGAGCAAAGATTAGATGATCAAATAAGAGGAATGCAGGAAAGGCTGAGGAATTTGAGTGAAGATGAAAAAAACCAGAAGTGGCTTTTTGTAACTGAAGAAGATATTAAGGGCCTACCCGGCTTGCAGAATGAAACTCTAATAGCAATTAAAGCCCCACATGGAACCACCTTGGAAGTCCCTGATCCTGAAGAAGCTGTTGACTATCCACAGAGGAGATACAGAATAATTCTAAGAAGCACAATGGGTCCCATTGATGTGTACCTCGTCAGTCAATTTGAGGAGAAATTTGAAGAGATGAATGGCGCCGAGCCCCCTGCAAGCCTCCCACTTGCTTCAAGTTCAGGGTCCAATGAGCACCTAGCAACAGAAATGACTCCTCTTGAAAACAATGGAAAGGGTCTTGAATCTCAAACTCAACCGTCTTCTCATACATGCTCTGATGTAAATGCTTCACCAGAGTTCGGTGGGGGCATTATGAGGATTGTTCCCTCTGACGTTGATAATGATGCAGATTACTGGCTACTATCAGATGCTGATGTTAGCATTACAGATATGTGGAGAACAGATTCCAGTGTTGATTGGAATGGGGTGGACATGCTTCCCTCTGATTTTGGAATCATTTCAAGGCCGCAAACTCCATCATCTGGGTTTGCTGATGGATCATCCACATTAGCTAACTCTACTCAGAGGTGA 1434 0.4491 MSAGVRASNRTASSPPPEGSQNRPPPKRHLAFASTKPPFVPPDDYHSFSSPNSRRPADQVPEAVVVRSPYIKRKSIVNDNNGESQEWSNSPATNVMSSPLKTPVSAKGGRTYNKSKVVKEGKSGPQTPMSNAGSPSLTPAGNCRYDSSLEKRMTKLWHNITGLLTKKFINLLKHAEDGDLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIHWKGIKSSTSGEVDGDASMLKADVDQLSLEEQRLDDQIRGMQERLRNLSEDEKNQKWLFVTEEDIKGLPGLQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPIDVYLVSQFEEKFEEMNGAEPPASLPLASSSGSNEHLATEMTPLENNGKGLESQTQPSSHTCSDVNASPEFGGGIMRIVPSDVDNDADYWLLSDADVSITDMWRTDSSVDWNGVDMLPSDFGIISRPQTPSSGFADGSSTLANSTQR 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2059 477 Coils Coil 234 268 - -
Mibi06g2059 477 MobiDBLite consensus disorder prediction 124 140 - -
Mibi06g2059 477 SUPERFAMILY E2F-DP heterodimerization region 235 338 IPR037241 -
Mibi06g2059 477 MobiDBLite consensus disorder prediction 455 477 - -
Mibi06g2059 477 PANTHER TRANSCRIPTION FACTOR E2F 82 438 IPR015633 GO:0000978|GO:0006357
Mibi06g2059 477 MobiDBLite consensus disorder prediction 374 397 - -
Mibi06g2059 477 MobiDBLite consensus disorder prediction 347 366 - -
Mibi06g2059 477 Gene3D - 142 223 IPR036388 -
Mibi06g2059 477 Pfam E2F transcription factor CC-MB domain 237 337 IPR032198 GO:0046983
Mibi06g2059 477 SMART E2F_TDP_2 162 221 IPR003316 GO:0005667|GO:0006355
Mibi06g2059 477 FunFam E2F transcription factor 1 138 223 - -
Mibi06g2059 477 Pfam E2F/DP family winged-helix DNA-binding domain 162 221 IPR003316 GO:0005667|GO:0006355
Mibi06g2059 477 MobiDBLite consensus disorder prediction 74 101 - -
Mibi06g2059 477 SUPERFAMILY "Winged helix" DNA-binding domain 162 222 IPR036390 -
Mibi06g2059 477 MobiDBLite consensus disorder prediction 1 17 - -
Mibi06g2059 477 MobiDBLite consensus disorder prediction 1 140 - -
Mibi06g2059 477 Gene3D - 228 338 - -
Mibi06g2059 477 CDD E2F_DD 237 338 IPR032198 GO:0046983
Mibi06g2059 477 MobiDBLite consensus disorder prediction 374 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2059 Mibi-ChrMibi06 41120034 41124020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2059 24 477 E2F-DP Transcription Factor Family AT2G36010 57.411 3.43e-166 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mibi06g2059 E2F_CC-MB 1e-33 No_clan