Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2041 ATGGCGACGTACTTCCATGATGGGAACCCTGAAATGCAACCACCGGATGGCCTCCAAACTCTTGTTCTCATGAACCGCAGCTACATCCACCACCCCGACACGCCGCCGCCTCCTCCGGGCAACCTTATTTTCCTCAACAACTCCTTCCCTCCCCAAAACATGCCTCCCAATCCCACCCAACAATTCGTCGGCATCCCTCTTCCCACCACCGCCGTAGATGGATCCACCCTGCATGGATTTGTGCCTCGCATGCAGTGCAATCTCTGGAACCCAATTGACCCCAACGCCACCGCGCGTGACACTCCACGCTCTCAGCAGCAGGGCCTATCGCTGAGCCTGTCGTCCCAGCAGCATGCCGGAATGGGCTCTTTTCGTGACGTGGCATCTAACATGTCCGCCGAGGATATTCGCGGGTCGGGTGGGTCGCCCTCTTCGGTGACGAACGTGAATGGAGTTCAGGGGATTCAGAGCGTGCTTATGAGCTCCAAGTACTTGAAAGCAGCTCAGGAACTTCTTGACGAGGCCGTTCATGTTGTTGACAACGGTATCAAGACTACTGAATTGGGAAAGAAGAGCGGTGGGGCCCATGCTAAAGTTACCGGTGAGACGTCTGGAACCGCTGCCAGTGGCGGCGACGGCTCTGTCGCCGGCGAAGGAAGTGTTAAGCGTGCTTCTGAGCTGTCAGCTGCGGAGAGACAGGAAATTCAGATGAAGAAGGCTAAGCTGATCTCCATGCTTGATGAGGTGGATCAGAGGTACAGGCAGTACCACCAGCAGATGCAGATAGTGACTTCGTCGTTTGAGCAAGCGGCGGGGATTGGGTCAGGAAGAACATACACGGCCCTTGCGCTGCGAACAATATCAAAGCAGTTCAGGTGCTTGAAGGATGCAATAACAGCCCAAATTGGAGCTGCAAATAAGAGTTTGGGAGAAGAAGATTATTGTTTAGGAAGCAAGAGTGAAGGTTCGAGGCTAAAGTATGTGGACCATCACCTTCGCCAACAGCGAGCTCTCCAACAGTTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGAGAGGGTTGCCTGAAAGATCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTCCACCCTTATCCCAAGGATTCTGATAAGCATATGCTTGCCAAGCAAACAGGCCTCACTAGGAGCCAGGTTTCGAATTGGTTCATAAATGCTCGAGTTCGGCTCTGGAAACCGATGGTGGAAGAAATGTACATGGAGGAGATGAAGGATCAAGAACAGAATGGATCTGAGGATAAGTCAGGGAAGAGTGGTGAAGATACTGCTATTAAAATTTTAGCTCCACAACAAAAAGGCCCTGCCACTGAAACAGACGCCAGAAGCCTCAACTCCAACCAAGACACGACTTCAAACCAGAACGCTCCTACAGTTTCAGTTTCTAACCCATTGATATCATCGCCAACTGGGGATAATGTCAGAAACCAGTTCGGCTTCAGCTTCATGGGATCATCAGAGCTAGAAGGGATCACGCAAGGAAGTCCCAAGAAGCCAAGAAACCAAGAAATTATACACTTCCCAGCTTCAATAAACATGGACGTGAAGCCCAATGAGGGCAATAACGAGCAACTTACAATAAAATTTGGAGAGGAAAGGCAGGGGAGGGAGGGATACTCATTCATGGGAACTCAAGCAAGCTTTATGGGAAGTTTTGGACAATACCCAATTGGGGAAATTGGAAGGTTTGAGGCAGAGCAGTTTACTCCAAGGTTTTCAGGAAATGGAGTTTCCCTGACTCTTGGTCTTCCCCACTGTGACACATTGTCAGGAAGCCATCAAACATTTCTCCCAAACCAGAACATACAATTGGGAAGAAGACTGGATCAGTTGGGTGAATCAAACGAGTATGGAGCCATGAACACTTCCACTAGTCACTCATCAGCTGCATTTGAGAATATGAACATGCAGAACCCAAAGAGGTTTGCGGCACAGTTGTTACCAGACTTTGTCACCTAA 2004 0.5005 MATYFHDGNPEMQPPDGLQTLVLMNRSYIHHPDTPPPPPGNLIFLNNSFPPQNMPPNPTQQFVGIPLPTTAVDGSTLHGFVPRMQCNLWNPIDPNATARDTPRSQQQGLSLSLSSQQHAGMGSFRDVASNMSAEDIRGSGGSPSSVTNVNGVQGIQSVLMSSKYLKAAQELLDEAVHVVDNGIKTTELGKKSGGAHAKVTGETSGTAASGGDGSVAGEGSVKRASELSAAERQEIQMKKAKLISMLDEVDQRYRQYHQQMQIVTSSFEQAAGIGSGRTYTALALRTISKQFRCLKDAITAQIGAANKSLGEEDYCLGSKSEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKDQEQNGSEDKSGKSGEDTAIKILAPQQKGPATETDARSLNSNQDTTSNQNAPTVSVSNPLISSPTGDNVRNQFGFSFMGSSELEGITQGSPKKPRNQEIIHFPASINMDVKPNEGNNEQLTIKFGEERQGREGYSFMGTQASFMGSFGQYPIGEIGRFEAEQFTPRFSGNGVSLTLGLPHCDTLSGSHQTFLPNQNIQLGRRLDQLGESNEYGAMNTSTSHSSAAFENMNMQNPKRFAAQLLPDFVT 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2041 667 MobiDBLite consensus disorder prediction 189 220 - -
Mibi06g2041 667 Pfam Associated with HOX 158 299 IPR006563 -
Mibi06g2041 667 Pfam Homeobox KN domain 366 405 IPR008422 GO:0003677|GO:0006355
Mibi06g2041 667 SMART prehox3 153 300 IPR006563 -
Mibi06g2041 667 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 97 434 - -
Mibi06g2041 667 MobiDBLite consensus disorder prediction 443 488 - -
Mibi06g2041 667 ProSiteProfiles 'Homeobox' domain profile. 346 409 IPR001356 GO:0003677
Mibi06g2041 667 Gene3D - 352 431 - -
Mibi06g2041 667 CDD homeodomain 349 409 IPR001356 GO:0003677
Mibi06g2041 667 MobiDBLite consensus disorder prediction 451 488 - -
Mibi06g2041 667 FunFam BEL1-like homeodomain protein 9 352 414 - -
Mibi06g2041 667 SMART HOX_1 349 413 IPR001356 GO:0003677
Mibi06g2041 667 SUPERFAMILY Homeodomain-like 350 416 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2041 Mibi-ChrMibi06 40883936 40886623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2041 1 666 Homeobox Transcription Factor Family AT2G35940 49.733 9.76e-176 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi06g2041 POX 3e-48 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1177 02 11625345 11627675 Mibi06g2041 06 40883936 40886623 CCT
Mibi06g2041 06 40883936 40886623 Mibi06g2041 06 40883936 40886623 ECH