Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2035 ATGAACGACCTTTTAAGCTCCTCCTTCCCCCGCTCTGCCGAAGATGACGGCAACCACCGCCACGTCATCCAGATGACGGAGTTAACAGACGGCGACAACCTCGAAAAGTTCTTCGAAGAAGTGGATTCACTCAAGAAGGAACTCAACGAGCTAGAACGCCTAAACCAATCACTCAGAAATTCCCATGAACAGAGCAAGACTCTTCATAACGCTAAGGCCATCAAAGACCTTCGTTCTCGCATGGATTCCGACGTCTCCCTTGCCCTCAAGAAAGCCAAGCTCATCAAGCTTCGTCTAGAGGCCCTTGACCGGTCCAACCAAGAAAACCGCTCGCTGCCCGGTTCAGGACCCGGTTCGTCCTCCGACCGGACCCGAACCTCCCTTGTCAACGGTCTGAGAAAGAAGCTCAAAGACTACATGGACAGCTTCAACAACCTCAGGCAACAGATCTCCACCGAGTACAAAGACACCGTACGACGTAGGTACTACACCGTCACCGGCGAGAATCCCGACGACAAAACCATCGACCTCCTTGTCTCCACTGGGGAGAGTGAAAATTTTCTGAAGAAAGCGATACAGCAGCAAGGGAGGGCGAATGTGATGGACACGATACAGGAGATTCAGGAGAGGCATGATGCGGTGAAAGTGATAGAGAGGAATCTGAATGAGCTGCATCAGGTGTTCTTGGATATGGCCGTTCTCGTTCAAACGCAGGGAGAGCAGTTGGATGATATAGAGAGCCACGTGGCAAGGGCTGATTCGTATGTGAGGGGTGGAGTCCAGCAGTTGCATGTTGCCAGGAAGCACCAGAAGAATACCAGGAAATGGACCTGCATTGCCATCTTAATTCTCATCATTATTATACTGATTATAGTTCTGCCTATTGTGTTAAGAAAGTGA 900 0.5033 MNDLLSSSFPRSAEDDGNHRHVIQMTELTDGDNLEKFFEEVDSLKKELNELERLNQSLRNSHEQSKTLHNAKAIKDLRSRMDSDVSLALKKAKLIKLRLEALDRSNQENRSLPGSGPGSSSDRTRTSLVNGLRKKLKDYMDSFNNLRQQISTEYKDTVRRRYYTVTGENPDDKTIDLLVSTGESENFLKKAIQQQGRANVMDTIQEIQERHDAVKVIERNLNELHQVFLDMAVLVQTQGEQLDDIESHVARADSYVRGGVQQLHVARKHQKNTRKWTCIAILILIIIILIIVLPIVLRK 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2035 299 CDD SynN 34 191 IPR006011 GO:0016020
Mibi06g2035 299 Gene3D - 190 297 - -
Mibi06g2035 299 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 31 161 - -
Mibi06g2035 299 SMART SynN_4 29 155 IPR006011 GO:0016020
Mibi06g2035 299 SUPERFAMILY t-snare proteins 33 259 IPR010989 GO:0016020|GO:0016192
Mibi06g2035 299 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 204 266 IPR000727 -
Mibi06g2035 299 SMART tSNARE_6 199 266 IPR000727 -
Mibi06g2035 299 Coils Coil 34 68 - -
Mibi06g2035 299 MobiDBLite consensus disorder prediction 106 126 - -
Mibi06g2035 299 CDD SNARE_syntaxin1-like 203 263 - -
Mibi06g2035 299 Gene3D - 31 164 - -
Mibi06g2035 299 Pfam Syntaxin 36 239 IPR006011 GO:0016020
Mibi06g2035 299 ProSitePatterns Syntaxin / epimorphin family signature. 210 249 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mibi06g2035 299 Coils Coil 129 149 - -
Mibi06g2035 299 FunFam Syntaxin 132 197 297 - -
Mibi06g2035 299 PANTHER SYNTAXIN 51 288 IPR045242 -
Mibi06g2035 299 Pfam SNARE domain 240 292 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2035 Mibi-ChrMibi06 40797093 40798369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2035 29 278 SNARE and Associated Proteins AT3G11820 73.600 6.37e-138 390