Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2034 ATGGCCATGCAAACTGTTTATTTCAAAGAACATGAAGGAATTGTGCACAACTCCATTGGGCAATTATCATCTGTAACCTCAACCCCCTGGTGGACTGCCCTTGGATCTCAAACGGTTCAACAGGAGTCTTTGGGCCAAATGATGAAACCTTTTTCACTGGACTTTCCCAACTATGTCGATCATCTTACTGGTCCCAAGCAGCCAGAAAGAGCAGCTCGTCAGGTTTTGGATAAAGGGCACACTACACAGTTCACTATCTTCCCAGAAGATTGCGAGATGTCTAATGATACACAAAAGCATCAGGCAGTCATGTCACTTTCATCCTCTCCTGAACCTCGTGGTCATTTTGAGATAAAATTTAGTCAGCCTCTGATCTGTTCCAAATATCCTTATATGGATCGATTTTATGGGCTCATCTCAACCTATGGACCTCAGATTCCGGGCCGTTTAATGCTGCCACTTAACTTGACATCCGAGGATGGGCCAATTTATGTAAATGCTAAGCAGTATCATGGGATCATCAGACGTCGGCAGTCACGCGCAAAGGCTTTACTTGAGAACAAATTGACAAAACGCCGCAGGCCCTATATGCATGAATCACGTCACCTCCATGCAATGAGGCGACCAAGAGGATGTGGTGGTCGCTTCCTGAACACAAGGAATCTAAAGAATGGGAATGGTGAAAGTGGAAGCACAGTAATCAAAACTGGGGAGGCTCTATTGTTCCAGTCCAGTGGTTCACAGAATTCTGAAGTACTGCAATCTGAAGGTGGAACTCTGAATTCATCAAAGGAAACTAATGGAAGCAGTTCAAATGTTTCGGGGTTAGAGGTGACTAGCATGTTTGCACGTGGAACTTTCGATGGCTTTGGCCTCAATCATCTGGGGCCCTCTGTGCACTCTTTTGCAGACATGATAGATAGTGGACGTGCCATTGCCATGCCTGCGAAATGGGTTGCAGCAGCGGGTAATTGCTGCAAAATCTAA 987 0.4559 MAMQTVYFKEHEGIVHNSIGQLSSVTSTPWWTALGSQTVQQESLGQMMKPFSLDFPNYVDHLTGPKQPERAARQVLDKGHTTQFTIFPEDCEMSNDTQKHQAVMSLSSSPEPRGHFEIKFSQPLICSKYPYMDRFYGLISTYGPQIPGRLMLPLNLTSEDGPIYVNAKQYHGIIRRRQSRAKALLENKLTKRRRPYMHESRHLHAMRRPRGCGGRFLNTRNLKNGNGESGSTVIKTGEALLFQSSGSQNSEVLQSEGGTLNSSKETNGSSSNVSGLEVTSMFARGTFDGFGLNHLGPSVHSFADMIDSGRAIAMPAKWVAAAGNCCKI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2034 328 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 162 216 IPR001289 GO:0003700|GO:0006355
Mibi06g2034 328 ProSiteProfiles NF-YA/HAP2 family profile. 159 219 IPR001289 GO:0003700|GO:0006355
Mibi06g2034 328 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 38 274 IPR001289 GO:0003700|GO:0006355
Mibi06g2034 328 Gene3D - 160 220 - -
Mibi06g2034 328 PRINTS CCAAT-binding transcription factor subunit B signature 162 184 IPR001289 GO:0003700|GO:0006355
Mibi06g2034 328 PRINTS CCAAT-binding transcription factor subunit B signature 193 216 IPR001289 GO:0003700|GO:0006355
Mibi06g2034 328 MobiDBLite consensus disorder prediction 246 273 - -
Mibi06g2034 328 SMART cbf3 158 219 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2034 Mibi-ChrMibi06 40789320 40792285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2034 1 328 CCAAT-HAP2 Transcription Factor Family AT3G05690 42.899 7.61e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Mibi06g2034 CBFB_NFYA 4.5e-25 No_clan