Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2033 ATGAGCAATAACAGTACAGGTAATTCCTCAGGGTTCCTAGGATCCAACAACATAAGTGGATTTGGGTATGGCATAGCAATATCAAGTGGGATTCTTCTTCTCATCACCACCATCACACTCACTTCATATTTCTGCACAAGAACACAGTCACCGCCATCTTCTCCCTCCGCCACCTCCTCCACCTCCCGGAGAAATCTCCCCTCATTCCTTGAGCCACATCACACGGTGGTGGTTGATGTTGGTATAGACGAAGCCGCCATTTTAAGCTACCCCAAGTTTCTCTATTCTGAGGCCAAGTTACAAAAACCAGATTCCACTGGAACATGTTGTTCCATATGCTTAGGAGATTATAGGAGCAGGGATATGCTACGGGAACTACCAGATTGTGGCCATGTATTCCACCTTAAGTGCATTGATCCATGGCTCAGACTGCATCCCACGTGTCCTCTCTGCAGAACATCTCCTGTTCCAACACCAATGGCAACACCTCTAGCCGAGGTGGTTCCACTAACAGCCCTGCGGGTATCGTAA 531 0.4802 MSNNSTGNSSGFLGSNNISGFGYGIAISSGILLLITTITLTSYFCTRTQSPPSSPSATSSTSRRNLPSFLEPHHTVVVDVGIDEAAILSYPKFLYSEAKLQKPDSTGTCCSICLGDYRSRDMLRELPDCGHVFHLKCIDPWLRLHPTCPLCRTSPVPTPMATPLAEVVPLTALRVS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2033 176 CDD RING-H2_PA-TM-RING 109 152 - -
Mibi06g2033 176 SMART ring_2 110 151 IPR001841 -
Mibi06g2033 176 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 166 IPR045899 -
Mibi06g2033 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 157 IPR013083 -
Mibi06g2033 176 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
Mibi06g2033 176 Pfam Ring finger domain 110 152 IPR001841 -
Mibi06g2033 176 SUPERFAMILY RING/U-box 94 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2033 Mibi-ChrMibi06 40779009 40779539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2033 10 172 C3H Transcription Factor Family AT2G35910 59.509 1.54e-54 170