Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2021 ATGGGAAACGTTTGTGTGTGTTTACGAACGACAACTTCAGATAATAAAGAAGTCCCCAATGTTTCGAATTCACGTGGGTGTTGTTCTCAATTCACAAACTTTATACCTTGCAATAACCGTATAGAAAATGAGAATGCAACCCCATGTAATAATGAGCCAAATCGCTCAAACACTGTCGCTCACAAGCCTCCAGAGGTGGCCAAAATGGAAAGGGACGATCCAAAATCAGTACTTGATGAGGGTGCCACCAAAAAGGCTCACGTCCCAGATTCTAAAATCCCTTCAGATCCCATAAGGCAGGTGGAGGAGCGAAGGGTAGCCGCAGAAGCATCAACTTCAAAAACAACGAAGAAAGTAAATCCCGCAGAACCAAGGAGGCCCTACACTGTGAAGAGGCAAGCGGTGGCAGGGTTTAAAGCATCGTCTGTGTTGCAAACAAAAACAGGAAATCTGAAGGAGTTCTACACTTTGGGAAGGAAGCTTGGGAATGGCCAATTTGGGACTACATTTCATTGTGTGGAGAAGGGCACAGGGAAAGAGTATGCTTGCAAGTCGATAGCCAAGAGGAAACTGAAAACACAAGAAGATTTGGAGGATGTAAGGAGGGAGATTCGGATAATGCATCACTTGGCAGGGTGTCCTAATGTGATATCCATAAAAGGGGCTTATGAAGATCCCATGGCTGTTCATGTTGTGATGGAACTATGTAAAGGTGGTGAGTTGTTTGATAGGATTGTGCAGAAAGGTCATTACACTGAGAGAAAAGCAGCTCAAATAGCCAGGACTGTGGTTGATGTCATTGAAGCTTGTCATGCATTAGGAGTCATGCATCGCGATCTTAAGCCCGAAAACTTTCTCTTCGTGAATGAGCAGGAAGATGCTCCTCTTAAGGCTATTGATTTTGGCTTGTCTGCTTTCTTCAAACCAGGGGATATATTTAGTGATGTGGTAGGAAGCCCATACTATGTTGCACCAGAAGTCCTGATGAGGAAGTATGGTCCAGAAGCTGATGTTTGGAGTGCTGGTGTGATCATATTCATTCTGTTATGCGGAGTGCCTCCGTTTTGGGGTGAAACGGAGCCTCAGATCTTTAAGGAGGTGTTGGAAGCTGAACTTGATTTCACGTCAGATCCCTGGCCTAATATTTCTGAAAGTGCAAAGGACTTGGTCAGGAAGATGCTTGTAAGAGATCCTAGCAAGAGATTGACAGCACATGAAGTGCTTTGTCATCCTTGGATCCGAGTTGATGGATCAGCTCCTGATAAGCCTCTTGACCCTGCAGTTCTGACTCGCTTGAAGCAGTTTTCTGCCATGAACAAGCTCAAAAAAATGGTTCTTAGAGTTATTGCAAAGAACCTGTCCGAAGAAGAAATAGCAGGGTTGAAAGAAATGTTTAAGATGATAGACACAGACAATAGTGGTCAAATTACTTTTCAAGAACTCAAGGCTGGACTGAAAGCCTTGGGGGCCAACATCGATGAAACTGAGATCCATAATCTTATGCAAGCAGCAGATGCTAACAATAGTGGCACATTAGACTATCAGGAATTCATAGCTGCAACCTTAAACCTCAACAAAGCCGTGAGAGAAGATAACTTAGTGGCTGCTTTCCGTTATTTTGACAAAGATGGAAGTGGTTACATCACTCGTGACGAGCTTCAACAAGTTTGTGAGGAACTTGGCCTTGAGAACATTCGCTTGGAGGACATCATCCGTGAGGCTGATCAAGATAATGATGGCCGGATAGACTACGATGAATTTGTGGCAGTGATGCAGAGAGGCGACGCAGATATAGTTAAGAAAGGTGTGAGGGGGAAAAGTAGTAGAGACTAG 1833 0.4419 MGNVCVCLRTTTSDNKEVPNVSNSRGCCSQFTNFIPCNNRIENENATPCNNEPNRSNTVAHKPPEVAKMERDDPKSVLDEGATKKAHVPDSKIPSDPIRQVEERRVAAEASTSKTTKKVNPAEPRRPYTVKRQAVAGFKASSVLQTKTGNLKEFYTLGRKLGNGQFGTTFHCVEKGTGKEYACKSIAKRKLKTQEDLEDVRREIRIMHHLAGCPNVISIKGAYEDPMAVHVVMELCKGGELFDRIVQKGHYTERKAAQIARTVVDVIEACHALGVMHRDLKPENFLFVNEQEDAPLKAIDFGLSAFFKPGDIFSDVVGSPYYVAPEVLMRKYGPEADVWSAGVIIFILLCGVPPFWGETEPQIFKEVLEAELDFTSDPWPNISESAKDLVRKMLVRDPSKRLTAHEVLCHPWIRVDGSAPDKPLDPAVLTRLKQFSAMNKLKKMVLRVIAKNLSEEEIAGLKEMFKMIDTDNSGQITFQELKAGLKALGANIDETEIHNLMQAADANNSGTLDYQEFIAATLNLNKAVREDNLVAAFRYFDKDGSGYITRDELQQVCEELGLENIRLEDIIREADQDNDGRIDYDEFVAVMQRGDADIVKKGVRGKSSRD 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2021 610 FunFam Calcium-dependent protein kinase 1 157 240 - -
Mibi06g2021 610 SUPERFAMILY Protein kinase-like (PK-like) 154 414 IPR011009 -
Mibi06g2021 610 CDD EFh 533 592 IPR002048 GO:0005509
Mibi06g2021 610 SUPERFAMILY EF-hand 452 592 IPR011992 -
Mibi06g2021 610 ProSitePatterns EF-hand calcium-binding domain. 541 553 IPR018247 -
Mibi06g2021 610 PANTHER SERINE/THREONINE-PROTEIN KINASE 145 587 - -
Mibi06g2021 610 MobiDBLite consensus disorder prediction 69 111 - -
Mibi06g2021 610 CDD STKc_CAMK 154 412 - -
Mibi06g2021 610 Gene3D - 420 596 - -
Mibi06g2021 610 Pfam Protein kinase domain 155 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2021 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Mibi06g2021 610 Pfam EF-hand domain pair 533 592 IPR002048 GO:0005509
Mibi06g2021 610 Pfam EF-hand domain pair 461 521 IPR002048 GO:0005509
Mibi06g2021 610 MobiDBLite consensus disorder prediction 69 124 - -
Mibi06g2021 610 ProSiteProfiles EF-hand calcium-binding domain profile. 566 597 IPR002048 GO:0005509
Mibi06g2021 610 ProSitePatterns EF-hand calcium-binding domain. 505 517 IPR018247 -
Mibi06g2021 610 ProSiteProfiles EF-hand calcium-binding domain profile. 528 563 IPR002048 GO:0005509
Mibi06g2021 610 ProSitePatterns Protein kinases ATP-binding region signature. 161 188 IPR017441 GO:0005524
Mibi06g2021 610 ProSiteProfiles EF-hand calcium-binding domain profile. 492 527 IPR002048 GO:0005509
Mibi06g2021 610 SMART serkin_6 155 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2021 610 SMART efh_1 460 488 IPR002048 GO:0005509
Mibi06g2021 610 SMART efh_1 566 594 IPR002048 GO:0005509
Mibi06g2021 610 SMART efh_1 496 524 IPR002048 GO:0005509
Mibi06g2021 610 SMART efh_1 532 560 IPR002048 GO:0005509
Mibi06g2021 610 CDD EFh 461 520 IPR002048 GO:0005509
Mibi06g2021 610 Gene3D Phosphorylase Kinase; domain 1 157 240 - -
Mibi06g2021 610 FunFam Calcium-dependent protein kinase SK5 241 425 - -
Mibi06g2021 610 Gene3D Transferase(Phosphotransferase) domain 1 241 419 - -
Mibi06g2021 610 ProSitePatterns EF-hand calcium-binding domain. 575 587 IPR018247 -
Mibi06g2021 610 FunFam Calcium-dependent protein kinase 1 421 595 - -
Mibi06g2021 610 ProSiteProfiles Protein kinase domain profile. 155 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2021 610 ProSiteProfiles EF-hand calcium-binding domain profile. 456 491 IPR002048 GO:0005509
Mibi06g2021 610 ProSitePatterns EF-hand calcium-binding domain. 469 481 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2021 Mibi-ChrMibi06 40683752 40686304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2021 1 594 EF-hand Containing Proteins AT3G10660 61.182 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi06g2021 Pkinase 9.8e-74 CL0016