Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2013 ATGTTTTCGTCTGAAGAAGGCGGCACAAGCGGAAAAATCAGCAACGAGCTTCATTGCAACTTTTGTTTGAGAGGAGAGGCTCCTCCTCCTCCTCTGCTAATAATATACAACACCACCATTACGGAGGCCGCTGCCGACTTCGATGATGAAGTTGAGATAGCGAGATGGAGGTTGGATGGTGGGGGTGACGTGAGAGGCCGTGGAGAACGCCGCGAAGGATATAATTTGATGGGAAACGTCTGTGTAGGACCTAATAACCTTGGTGCGAATGGCTTCTTGCAATCGATCGCGTCCGCTTTCAGGAAAAATCCGCCACCGGAGGGAAGGCTTCCGGCCCCTAACGCCGATAACGACAATGACAGCACCGGAAATGCCGAGCCTCATCCACCTCAAGATTTTCACGCTCCAAATCAAGCTCAAATTACTCCACCCGAATTTGTGAAAATCCCCAGAGATGAAAAATCACCTCCAAAACCCCAAAATCCGGCACCAAAATCCGAAAAGCGTGTCAAATCAGAGGTTAATCAACCTTACGGAAGTAATAATGGTGATGCTAGGAAAGATGAAAATCCCTCTAATTACATTGTCAGGTCAGGGGTGGTGGACGAAGCTTTCTATGGCAATACGGCTAATAATAATGCTGATGAAGCTACGAAACATACACATGTTAGAAGGCCATCGAGCATGGGGCTTCGAATAGAATCAGTGTTAGGGGGGAAAGGGAAATCTGGGAATATGAGGGATTTTTACAGTCTAGGGCGGAAGCTCGGGGAAGGGCAATATGGGACAACATACTTCTGTTTAGAGAAGGCAACTGGGAAAGAGTTTGCCTGTAAATCGATTCTTAAGAGGAATTTGGTCATACAAGAGGATATAGACGATTTGAGAAGGGAGATTCAGGTAATGCACCACGTGGCTGGTCATCCCAATGTGGTAAAGATAGTTGGTGCTTATGAGGATGCTGTGGCTGTTTATGTCGTTATGGAATTTTGTACTGGTGGAGAGCTTTTTCAAAGGATATTACAGATAGGGCGCTACACTGAGAAAAAGGCAGCTGAGATTGCTAAGAAGATTGTTGGTATCGTGGAGGCATTGCATTCTATGGGGGTCATGCATCGAGACTTGAAGCCAGAGAACTTTCTGTTCGCTGGCCCAGAGGAAGATTCACAGCTTAAGGTAATAGATTTTGGGCTCTCCGCGTTCTTCAAACCAGGTGAAACATTTACCCAACTGCTTGGGAGCCCCTATTACGTGGCCCCTGAAGTTTTACACAGGTCCTATGGTAAAGAATGTGACGTCTGGAGTGCAGGGGTGATGATTTATGTCTTACTAAGTGGATTTCCCCCATTTTGGGCCGAATCGGAGTCAGACATATTTTGTCAAGTTTTACATGAAGAACTTGACCTTGAATCTGACCCATGGCCTAGCATTTCTGCAAGTGCAAAGGATCTTCTTCGAAAAATGCTAGCCAAAGACCCTAAGAAGCGACTAACGGCGCATGAAGTTCTTAACCATCCTTGGTTCCATACTGAAGGCCTTGCTCTTGATAAACCCCTTGATTCTGTCGTTTTAACTCGTTTGAAGCAATTTTCTACCAGGCGCAACAAGTTCAAAAAGATAGCGATCCGAGTAATTGCTGAAAGTCTGTCGGAGGATGAAATTGCGGGGTTGAAAGAAATGTTCAAGATGATAGACACAGATAATAGTGGACACATCACTCGTGAGGAACTGAAAGCTGGTCTGGAGAGAGTGGGTGCTTTCCTCAAGGATTCTGAAATCAATCGGTTAATGCAATCGGCAGATACTGATAATAGCGGTACAATAGACTATGGTGAATTTTTAGCAGCTATGCTTCACGAAACCAAGATCCAACAGGAAGATAATCTATATACCGCCTTCACCTATATTGACAAAGATGGTAGCGGGTACATCACGCTGGACGAGCTCCAGCAAGTGTGCCAGCAGTTTGGTCTGCAAGATGTTCAATTGGATGATTTAATCCGCGAAGTTGACCAGGATAATGATGGGCGCATTGATTATAATGAGTTTGCTGCAATGATGCAAGACTCTGGTTTAAGCCAGGAGCTAGGGACTTTGGAAGCGCGCGAATAG 2112 0.4555 MFSSEEGGTSGKISNELHCNFCLRGEAPPPPLLIIYNTTITEAAADFDDEVEIARWRLDGGGDVRGRGERREGYNLMGNVCVGPNNLGANGFLQSIASAFRKNPPPEGRLPAPNADNDNDSTGNAEPHPPQDFHAPNQAQITPPEFVKIPRDEKSPPKPQNPAPKSEKRVKSEVNQPYGSNNGDARKDENPSNYIVRSGVVDEAFYGNTANNNADEATKHTHVRRPSSMGLRIESVLGGKGKSGNMRDFYSLGRKLGEGQYGTTYFCLEKATGKEFACKSILKRNLVIQEDIDDLRREIQVMHHVAGHPNVVKIVGAYEDAVAVYVVMEFCTGGELFQRILQIGRYTEKKAAEIAKKIVGIVEALHSMGVMHRDLKPENFLFAGPEEDSQLKVIDFGLSAFFKPGETFTQLLGSPYYVAPEVLHRSYGKECDVWSAGVMIYVLLSGFPPFWAESESDIFCQVLHEELDLESDPWPSISASAKDLLRKMLAKDPKKRLTAHEVLNHPWFHTEGLALDKPLDSVVLTRLKQFSTRRNKFKKIAIRVIAESLSEDEIAGLKEMFKMIDTDNSGHITREELKAGLERVGAFLKDSEINRLMQSADTDNSGTIDYGEFLAAMLHETKIQQEDNLYTAFTYIDKDGSGYITLDELQQVCQQFGLQDVQLDDLIREVDQDNDGRIDYNEFAAMMQDSGLSQELGTLEARE 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2013 703 Pfam Protein kinase domain 250 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2013 703 Gene3D Transferase(Phosphotransferase) domain 1 336 532 - -
Mibi06g2013 703 MobiDBLite consensus disorder prediction 173 188 - -
Mibi06g2013 703 ProSitePatterns Protein kinases ATP-binding region signature. 256 283 IPR017441 GO:0005524
Mibi06g2013 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 370 382 IPR008271 GO:0004672|GO:0006468
Mibi06g2013 703 CDD STKc_CAMK 249 507 - -
Mibi06g2013 703 ProSiteProfiles Protein kinase domain profile. 250 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2013 703 MobiDBLite consensus disorder prediction 99 192 - -
Mibi06g2013 703 Gene3D - 533 691 - -
Mibi06g2013 703 CDD EFh 557 617 IPR002048 GO:0005509
Mibi06g2013 703 SUPERFAMILY EF-hand 549 688 IPR011992 -
Mibi06g2013 703 FunFam Calcium-dependent protein kinase 5 336 516 - -
Mibi06g2013 703 ProSiteProfiles EF-hand calcium-binding domain profile. 588 623 IPR002048 GO:0005509
Mibi06g2013 703 ProSitePatterns EF-hand calcium-binding domain. 601 613 IPR018247 -
Mibi06g2013 703 SMART serkin_6 250 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2013 703 FunFam Calcium-dependent protein kinase 1 252 335 - -
Mibi06g2013 703 ProSiteProfiles EF-hand calcium-binding domain profile. 624 657 IPR002048 GO:0005509
Mibi06g2013 703 CDD EFh 632 688 IPR002048 GO:0005509
Mibi06g2013 703 ProSiteProfiles EF-hand calcium-binding domain profile. 552 587 IPR002048 GO:0005509
Mibi06g2013 703 FunFam Calcium-dependent protein kinase 1 516 691 - -
Mibi06g2013 703 SMART efh_1 556 584 IPR002048 GO:0005509
Mibi06g2013 703 SMART efh_1 628 656 IPR002048 GO:0005509
Mibi06g2013 703 SMART efh_1 592 620 IPR002048 GO:0005509
Mibi06g2013 703 SMART efh_1 662 690 IPR002048 GO:0005509
Mibi06g2013 703 ProSitePatterns EF-hand calcium-binding domain. 565 577 IPR018247 -
Mibi06g2013 703 Gene3D Phosphorylase Kinase; domain 1 252 335 - -
Mibi06g2013 703 SUPERFAMILY Protein kinase-like (PK-like) 248 519 IPR011009 -
Mibi06g2013 703 Pfam EF-hand domain pair 627 688 IPR002048 GO:0005509
Mibi06g2013 703 Pfam EF-hand domain pair 557 617 IPR002048 GO:0005509
Mibi06g2013 703 ProSitePatterns EF-hand calcium-binding domain. 671 683 IPR018247 -
Mibi06g2013 703 ProSiteProfiles EF-hand calcium-binding domain profile. 658 693 IPR002048 GO:0005509
Mibi06g2013 703 PANTHER SERINE/THREONINE-PROTEIN KINASE 241 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2013 Mibi-ChrMibi06 40621498 40627346 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2013 77 694 EF-hand Containing Proteins AT2G38910 58.070 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi06g2013 Pkinase 2.1e-74 CL0016