Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2001 ATGGGCCGTTCAGAACCCATACATAGGGTTTTTCTGCTCATCCACGAAGTTTCCCCGCCAGAGCTTCAAAAGGGTAGCCGCCTTGTGCCTGTTGCTCCTGTCTCTCTTCCACTCGAAGCACAAGTTCTCATGGCTGAAGTGGTGGCAATTCCTCCTGAAGCTACCACGAGTATAGATCCGACACAGATCGAGGTGAAGCTCTTTAACAGGTGGACTTTCGACGATGTTCAGGTTAATGATATCTCTTTGGCTGATTATATTGGAGTGGCCGCATCCAAGCATGCAACATATGTTCCTCACACTGCTGGTAGGTATTCGGTGAAGCGATTCAGGAAAGCACAGTGTCCAATTGTTGAGAGGCTTACTAATTCTCTCATGATGCATGGTAGAAACAACGGGAAGAAGTTAATGGCAGTGAGGATTATTAAGCATGCCATGGAAATTATCCACCTTCTAACTGATCAGAATCCTATTCAAGTTATTGTTGATGCTGTGATTAACAGTGGTCCTCGTGAAGATGCAACTAGAATTGGATCTGCTGGCGTTGTGAGGAGACAGGCTGTGGATATATCGCCCCTTCGCCGTGTTAATCAGGCCATCTATCTTCTAACTACTGGCGCCCGTGAATCTGCATTCAGAAATATAAAGACCATTGCTGAATGCTTGGCTGACGAACTCATCAATGCAGCAAAGGGGTCATCCAACAGCTATGCAATCAAGAAAAAAGACGAGATTGAAAGAGTTGCCAAGGCAAATCGTTAA 762 0.4567 MGRSEPIHRVFLLIHEVSPPELQKGSRLVPVAPVSLPLEAQVLMAEVVAIPPEATTSIDPTQIEVKLFNRWTFDDVQVNDISLADYIGVAASKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2001 253 PANTHER RIBOSOMAL PROTEIN S7 46 253 IPR000235 GO:0006412
Mibi06g2001 253 SUPERFAMILY Ribosomal protein S7 66 253 IPR036823 -
Mibi06g2001 253 CDD uS7_Eukaryote 66 253 IPR005716 GO:0003735|GO:0006412|GO:0015935
Mibi06g2001 253 Gene3D Ribosomal protein S7 domain 47 253 IPR036823 -
Mibi06g2001 253 Pfam Ribosomal protein S7p/S5e 107 253 IPR023798 -
Mibi06g2001 253 TIGRFAM uS7_euk_arch: ribosomal protein uS7 64 253 IPR005716 GO:0003735|GO:0006412|GO:0015935
Mibi06g2001 253 FunFam 40S ribosomal protein S5 49 253 - -
Mibi06g2001 253 ProSitePatterns Ribosomal protein S7 signature. 119 145 IPR020606 GO:0003723|GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2001 Mibi-ChrMibi06 40540304 40543928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2001 64 253 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 92.105 1.46e-132 371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2001 06 40540304 40543928 Mibi06g2001 06 40540304 40543928 ECH