Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi06g2000 | ATGAACAGGATGGAGTCTCAGGTGAAGCATGCAGTGGTTGTTAAAGTCATGGGACGCACTGGATCCAGAGGGCAAGTGACTCAAGTTAGAGTTAAGTTTTTGGATGACCATAACCGTTATATCATGAGGAATGTGAAAGGACCCGTGAGGGAAGGAGACATTCTTACCTTACTTGAGTCTGAAAGGGAAGCTAGAAGACTTCGCTAG | 207 | 0.4541 | MNRMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDHNRYIMRNVKGPVREGDILTLLESEREARRLR | 68 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi06g2000 | 68 | Hamap | 30S ribosomal protein S28e [rps28e]. | 1 | 68 | IPR000289 | GO:0003735|GO:0005840|GO:0006412 | |
Mibi06g2000 | 68 | CDD | S1_S28E | 9 | 68 | IPR000289 | GO:0003735|GO:0005840|GO:0006412 | |
Mibi06g2000 | 68 | PANTHER | 40S RIBOSOMAL PROTEIN S28 | 4 | 68 | IPR000289 | GO:0003735|GO:0005840|GO:0006412 | |
Mibi06g2000 | 68 | SUPERFAMILY | Nucleic acid-binding proteins | 4 | 68 | IPR012340 | - | |
Mibi06g2000 | 68 | FunFam | 40S ribosomal protein S28 | 1 | 68 | - | - | |
Mibi06g2000 | 68 | Pfam | Ribosomal protein S28e | 7 | 67 | IPR000289 | GO:0003735|GO:0005840|GO:0006412 | |
Mibi06g2000 | 68 | ProSitePatterns | Ribosomal protein S28e signature. | 59 | 67 | IPR028626 | - | |
Mibi06g2000 | 68 | Gene3D | - | 1 | 68 | IPR012340 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi06g2000 | Mibi-ChrMibi06 | 40537795 | 40538001 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi06g2000 | 4 | 68 | Cytoplasmic Ribosomal Protein Gene Family | AT5G03850 | 90.769 | 9.94e-37 | 115 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mibi06g2000 | 06 | 40537795 | 40538001 | Mibi06g2000 | 06 | 40537795 | 40538001 | ECH |