Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1999 ATGAGAGTCTTTTTCCTTTCTCCAACAATCACTATTCTTTCCAACCCATTAACCAAAGTCTTATTCAATTACCTAGCATATATACAAGGCCCATTACTCCTAGCCCAACTGCAAACCCTAGCCCACCTTCTAACCTATCTACGCCCTCCTCTCCTTTGTCGCAAACAATCCCTACCCCTCCGTCAACATTCCTCTCAACCTCGTCTTCCTCTTCTGCCTACTTCAGTTCTGCAAATCAACCACCTCACTGTTTTCGTCAATCGTTCAGATTCTTGGATATTTTCATTTGTTGTTTGTTGCTCTCAATTAAGGATGGCTTCTAGATTCTGGACACAGGGTGCTAGTGACTCTGAGGGAGAGGAGGTTGACGATGGCATAGGTGTTGATGATGTATTGGATGAAGATACCAACCCAGATGATAAAAGCAAATACTTGGTTGGTAATGCCAGTGATAGTGATGATTCTGACGATCAGAGGCGTGTTGTCAGGTCAGCAAAAGACAAGCGATTTGAAGAGATGTCATCTACAATTGACCAGATGAAGAATGCTATGAAGATTAATGACTGGGTGAGCTTGCAAGAGAGCTTTGATAAGATAAACAAGCAACTCGAGAAAGTCATGCGTGTCACCGAATCTGATAAGGTCCCTGGTATTTACATAAAAGCGCTTGTGATGTTGGAAGACTTCCTGGCACAGGCTCTGGCAAATAAGGATGCCAAAAAGAAGATGAGTAGTAGTAATGCTAAAGCATTAAACTCAATGAAGCAGAAATTGAAGAAGAATAATAAACAGTATGAGGATTTGATTGCCAAATATAGAGAAAATCCTGAGAGTGATGACAAAGATGAAGAGGAGTCGGAGGATGAGGATGAAAGTGAGGAGGAGGTAATTGAGGAGATTGATAAGATTCAAAAGTCAGATTCTGAAGATGGCGATCAAGATGATGAGAAGTCAGATGCAATGGATACCCCTTGGGACCAAAAACTCAGCAAAAAAGACAGGCTTATGGATAGGCAATTTATGAAAGATCCTAGTGAGATCTCATGGGACATGGTTAACAAGAAGTTCAAAGAGGTTGTGGCAGCTAGGGGCAGGAGGGGAACTGGAAGGTTTGAGCAAGTTGAGCAGCTTACCTTCCTAACAAAAGTGGCTAAAACTCCAGCGCAGAAGCTGGAAATATTTTTCAATGTTGTTTCTGCTCAATTTGATGTTAATCCTGGTTTAAATGGACACATGCCTATTAATGTGTGGAAGAAATGTGTGCAGAATATGCTGGTCATTCTTGATATTCTTGTGCAACACCCAAACATAGTTGTTGATGATACAGTGGAGCCTGATGAGAATGAAACTCAGAAGGGTGCTGACCATAGCGGACCGATTCGGGTATGGGGCAACTTAGTTGCATTCCTAGAAAGAATTGATGCTGAGTTTTTTAAGAGCTTGCAATGCATTGATCCTCATACTCGTGAGTATGTTGAGAGGCTTAGGGACGAGCCCATGTTTCTGGCTCTTGCACAGAATGTCCAGGATTATCTTGAAAGGGTTGGAGATTTCAAAGCTTCATCAAAGGTAGCCCTTAGGCGTGTTGAACTTATCTATTACAAACCACAAGAGGTTTATGATGCCATGAGGAAATTGGCTGAATTGGCAGATGAAAGTAATGGAGAGGCGGACGATGAGTCTAAAGGGTTTGAGGATACAAGGACTCCTAAGGCATTTGTTGTAACTCCTGAACTTGTTCCTCGAAAGCCTACCTTCCCAGAGAATAGTAGGACCCTAATGGACTTATTGGTGTCCCTGATATACAAGAATGGTGATGAGCGGACGAAGGCACGTGCTATGCTTTGTGATATATATCATCATGCTCTTCTGGATGAGTTCTCTACTGCTCGTGATCTTCTGCTTATGAGCCATTTGCAGGATAGTGTTCAACATATGGACATATCAACACAGATACTTTTTAACAGGGCTATGTCACAGCTTGGTCTTTGTGCTTTTAGGCTTGGACAAATTTCTGAGGCTCATGGCTGTCTCTCTGAGTTATATTCGGGTGGAAGGGTCAAGGAGCTGCTTGCTCAAGGTGTCTCACAAAGTCGCTATCATGAGAAGACTCCAGAGCAGGAAAGGTTGGAAAGGAGACGCCAGATGCCATATCATATGCACATTAACCTTGAGCTCCTGGAGTCAGTGCATCTTATATGTGCTATGCTTCTGGAAGTTCCTAACATTGCGGCTAATGACCATGATGCAAAGCGCAAAGTTATTAGTAAGACGTTTCGTCGCTTGCTTGAGGTCAGTGAGAAGCAAACATTTACAGGCCCACCTGAAAATGTCAGAGATCATGTCATGGCTGCTACAAGGGCCCTTGGCAAGGGCGATTTCCATAACAGTTTTGATATAATCAAGTCGCTGGATGTCTGGAAATTTGTTAGGAATCATGACAAGGTGCTGGAAATGCTTAAGGAAAAAATCAAGGAGGAGGCACTAAGGACATACCTGTTTACCTTCTCTTCTTCCTATGACTCTTTGAGCCTCGAGCAACTTACAAAAATGTTTGACCTCTCTGTTCCTCACACCCATAGCATAATTAGCAGGATGATGATAAATGAGGAGCTGCATGCAAGCTGGGATCAACCAACTGGCTGCATTGTTTTCCAGGATGTAAAACACTCTAGATTGCAGGCTTTAGCCTTCCAACTTACAGAGAAGTTATCTATCCTTGCAGAGAGTAATGAAAGAGCTACAGAGGCAAGGATAGGTGGTGGTGGATTGGATCTTCCCCTGAGGCGGCGAGACAGCCAGGACTATGCTGCTGCTGCTGCAACAACCACTGTTGGTGGTAGGTGGCAAGACCTGTCAGCTACTCAGACAAGGCAAGGCGGTGGTACCGGACGTGCAGGGTATAGTATTGGTGGCGGAAGGCCATTAACATTGAGCCAGAACAGCTATACAAGGGACCGAACAGGAAGAGGAGCGGGTGGAGGCTATCAGAGTACGAGATATCAAGACTCTGCATATGGTGGTTCAGGCAGGACAAGTCAGGGTTCAGCACTCAGGGGAGCCCAGGCAGATGCATCTACCCGTATGGTTAGCCTTAAAGGAGTTCGTGCTTAG 3114 0.4419 MRVFFLSPTITILSNPLTKVLFNYLAYIQGPLLLAQLQTLAHLLTYLRPPLLCRKQSLPLRQHSSQPRLPLLPTSVLQINHLTVFVNRSDSWIFSFVVCCSQLRMASRFWTQGASDSEGEEVDDGIGVDDVLDEDTNPDDKSKYLVGNASDSDDSDDQRRVVRSAKDKRFEEMSSTIDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESDKVPGIYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLIAKYRENPESDDKDEEESEDEDESEEEVIEEIDKIQKSDSEDGDQDDEKSDAMDTPWDQKLSKKDRLMDRQFMKDPSEISWDMVNKKFKEVVAARGRRGTGRFEQVEQLTFLTKVAKTPAQKLEIFFNVVSAQFDVNPGLNGHMPINVWKKCVQNMLVILDILVQHPNIVVDDTVEPDENETQKGADHSGPIRVWGNLVAFLERIDAEFFKSLQCIDPHTREYVERLRDEPMFLALAQNVQDYLERVGDFKASSKVALRRVELIYYKPQEVYDAMRKLAELADESNGEADDESKGFEDTRTPKAFVVTPELVPRKPTFPENSRTLMDLLVSLIYKNGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRLGQISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLICAMLLEVPNIAANDHDAKRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAATRALGKGDFHNSFDIIKSLDVWKFVRNHDKVLEMLKEKIKEEALRTYLFTFSSSYDSLSLEQLTKMFDLSVPHTHSIISRMMINEELHASWDQPTGCIVFQDVKHSRLQALAFQLTEKLSILAESNERATEARIGGGGLDLPLRRRDSQDYAAAAATTTVGGRWQDLSATQTRQGGGTGRAGYSIGGGRPLTLSQNSYTRDRTGRGAGGGYQSTRYQDSAYGGSGRTSQGSALRGAQADASTRMVSLKGVRA 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1999 1037 MobiDBLite consensus disorder prediction 318 337 - -
Mibi06g1999 1037 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 819 907 - -
Mibi06g1999 1037 MobiDBLite consensus disorder prediction 115 167 - -
Mibi06g1999 1037 ProSiteProfiles PCI domain profile. 718 890 IPR000717 -
Mibi06g1999 1037 MobiDBLite consensus disorder prediction 239 257 - -
Mibi06g1999 1037 SUPERFAMILY "Winged helix" DNA-binding domain 815 890 IPR036390 -
Mibi06g1999 1037 SMART PINT_4 819 907 IPR000717 -
Mibi06g1999 1037 Pfam PCI domain 758 886 IPR000717 -
Mibi06g1999 1037 MobiDBLite consensus disorder prediction 136 167 - -
Mibi06g1999 1037 MobiDBLite consensus disorder prediction 995 1021 - -
Mibi06g1999 1037 Coils Coil 248 275 - -
Mibi06g1999 1037 MobiDBLite consensus disorder prediction 279 297 - -
Mibi06g1999 1037 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 150 750 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mibi06g1999 1037 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 105 1032 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mibi06g1999 1037 MobiDBLite consensus disorder prediction 271 337 - -
Mibi06g1999 1037 MobiDBLite consensus disorder prediction 954 1037 - -
Mibi06g1999 1037 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 106 964 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mibi06g1999 1037 MobiDBLite consensus disorder prediction 117 135 - -
Mibi06g1999 1037 MobiDBLite consensus disorder prediction 238 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1999 Mibi-ChrMibi06 40524302 40529028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1999 105 1037 Eukaryotic Initiation Factors Gene Family AT3G56150 67.766 0.0 1202