Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1992 ATGAGTTATACTAATTTTCTCACTTCCTCTTTCCCTTCCCTTCCTTTTCGCTCCGCATGCTGCGAGCAGCTACAGAAGGACGCCGGAAAATTTTCATCTAGGGTTTGCCCTAATCCGGTATTAACCCTGACGGTCCTGATTGATCAAATTAGCGAGATGGGTGTGAATTCCCTGCCATCGGAGTCCAGCAACGATCTCGATGAGCAGATCTCGCAATTAATGCAGTGCAAGCCGCTGTCAGAGCAACAGGTTAGAGTTTTATGCGAGAAGGCAAAGGAGATTTTGATGGATGAAAGCAATGTCCAGCCAGTGAAAAGTCCTGTGACAATTTGTGGAGATATTCATGGACAGTTTCATGATCTAGCCGAGCTATTTCGAATTGGAGGAAAGTGTCCAGATACAAACTACTTGTTTATGGGGGATTATGTGGACCGAGGTTATTATTCAGTTGAGACTGTAACACTCCTTGTGGCTTTGAAAGTTCGGTATCCTCAACGAATTACTATTCTTCGAGGAAACCATGAAAGCCGTCAGATTACTCAAGTTTATGGATTTTATGATGAATGCCTTAGAAAATATGGTAATGCCAATGTTTGGAAGATCTTTACAGACCTTTTTGATTACTTTCCATTGACTGCATTGGTTGAATCAGAAATATTTTGTTTGCATGGTGGACTGTCGCCATCAATTGAAACCCTTGATAATATAAGGAACTTTGATCGTGTTCAAGAGGTTCCTCATGAAGGGCCGATGTGTGATCTGTTATGGTCCGACCCTGATGACAGATGTGGCTGGGGGATTTCTCCCCGTGGTGCTGGATACACCTTTGGCCAGGATATATCTGAGCAATTCAATCACACAAACAGTCTTAAGTTAATTGCTAGAGCTCACCAGCTGGTGATGGATGGATTTAACTGGGCTCATGAACAAAAGGTGGTAACAATATTTAGTGCACCTAACTACTGTTACAGATGTGGGAACATGGCTTCCATTTTGGAGGTTGATGATTGCAGGAGCCACACGTTTATCCAGTTTGAACCGGCTCCTAGGAGAGGTGAACCTGATGTCACCCGTAGGACACCTGATTACTTCCTATAA 1098 0.4344 MSYTNFLTSSFPSLPFRSACCEQLQKDAGKFSSRVCPNPVLTLTVLIDQISEMGVNSLPSESSNDLDEQISQLMQCKPLSEQQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1992 365 FunFam Serine/threonine-protein phosphatase 59 365 - -
Mibi06g1992 365 CDD MPP_PP2A_PP4_PP6 65 349 - -
Mibi06g1992 365 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 64 365 - -
Mibi06g1992 365 Pfam Calcineurin-like phosphoesterase 107 298 IPR004843 GO:0016787
Mibi06g1992 365 PRINTS Serine/threonine phosphatase family signature 136 163 IPR006186 GO:0016787
Mibi06g1992 365 PRINTS Serine/threonine phosphatase family signature 311 327 IPR006186 GO:0016787
Mibi06g1992 365 PRINTS Serine/threonine phosphatase family signature 169 193 IPR006186 GO:0016787
Mibi06g1992 365 PRINTS Serine/threonine phosphatase family signature 204 230 IPR006186 GO:0016787
Mibi06g1992 365 PRINTS Serine/threonine phosphatase family signature 107 134 IPR006186 GO:0016787
Mibi06g1992 365 PRINTS Serine/threonine phosphatase family signature 289 309 IPR006186 GO:0016787
Mibi06g1992 365 PRINTS Serine/threonine phosphatase family signature 233 260 IPR006186 GO:0016787
Mibi06g1992 365 SMART pp2a_7 79 349 IPR006186 GO:0016787
Mibi06g1992 365 SUPERFAMILY Metallo-dependent phosphatases 62 350 IPR029052 -
Mibi06g1992 365 Gene3D - 59 365 IPR029052 -
Mibi06g1992 365 ProSitePatterns Serine/threonine specific protein phosphatases signature. 170 175 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1992 Mibi-ChrMibi06 40425900 40432878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1992 71 295 Calmodulin-binding Proteins AT5G63870 34.457 1.32e-32 122