Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1984 ATGGACAAAGCTAATTTTTCAGAGACTAGTAATAGTAGAGAGACACATGACTTCATGAACGTCGACTCTTTCTCTCAGCTTCCCTTTATCCGACCTTCCCCTCTTAAAGAAAAGCCCATCAAGCTCTTTGGCATTGAATTCGGCTCCGCTGAAACCGCCTCCGCGGCGGCCCCACCAGCGGAAGATTCCGAATCCGCCGACGAGTCAACCGGCAAGGACAACAACAACAACAACAGCAGCAATAACGGAGAGACTAACAGGAGATTTGAATGCCACTACTGTTGCAGGAACTTCCCAACTTCACAAGCCTTAGGTGGCCACCAAAACGCTCACAAAAGAGAACGCCAACACGCTAAAAGAGCACACCTTCACATGTCAGAAGCTCAAGTGTATAGCCTTGTCAACTACAGGTCCTTCACTTCACCTACTTCTACCTTAACCCCTCCATTGCCTTCTCCTCCTTCTTCTTCTTCTTCTTCTGCTTATAATAATAATAGGTTTTATGGGAGTCCATATTCCCATCACCACCACCATCATCCCACCATCAATGGAAGCCCTTTAGCTTTGTGGCGTATCCCCACCCTCCAAACTACTGCTAATATTAACCCTACTTTCAATCGTGACCGTTCGTTGAATCCTTTGCCCTCCTTTGCCGTTGGCGAGGATATTATGGGCAATAATATGAAGGCCTCTTCGCTGCAGCTTGCTGGCCGGTCTGCTTCACCGTTGCAAAACCCCATGTACGTTCATGACTCTAAACCCGCCGTTAATGTTCATTCTCAAGACCATGTGAGTTTGGATCTTCATCTGTAA 813 0.4723 MDKANFSETSNSRETHDFMNVDSFSQLPFIRPSPLKEKPIKLFGIEFGSAETASAAAPPAEDSESADESTGKDNNNNNSSNNGETNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLHMSEAQVYSLVNYRSFTSPTSTLTPPLPSPPSSSSSSAYNNNRFYGSPYSHHHHHHPTINGSPLALWRIPTLQTTANINPTFNRDRSLNPLPSFAVGEDIMGNNMKASSLQLAGRSASPLQNPMYVHDSKPAVNVHSQDHVSLDLHL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1984 270 Gene3D Classic Zinc Finger 65 140 - -
Mibi06g1984 270 PANTHER ZINC FINGER PROTEIN GIS 3 270 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Mibi06g1984 270 MobiDBLite consensus disorder prediction 51 84 - -
Mibi06g1984 270 MobiDBLite consensus disorder prediction 70 84 - -
Mibi06g1984 270 Pfam C2H2-type zinc finger 88 113 - -
Mibi06g1984 270 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Mibi06g1984 270 MobiDBLite consensus disorder prediction 1 21 - -
Mibi06g1984 270 SUPERFAMILY beta-beta-alpha zinc fingers 86 117 IPR036236 -
Mibi06g1984 270 MobiDBLite consensus disorder prediction 142 162 - -
Mibi06g1984 270 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1984 Mibi-ChrMibi06 40386605 40387417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1984 8 270 C2H2 Transcription Factor Family AT3G58070 38.434 1.51e-39 136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1113 02 11067796 11068557 Mibi06g1984 06 40386605 40387417 CCT
Mibi06g1984 06 40386605 40387417 Mibi06g1984 06 40386605 40387417 ECH