Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1969 ATGTTCCACAAGTATCAATTACAAGCACTAATCTTCATTATAGTTATTGCTCTCGCTCAAGCTAGTAGCTTTTCTTTCAATTACCCAACCTTTCAGCCATCGGATGAACCCAGTTTAATTCTGAGCAAGAACTCAAAAATATACCTGGATGCCATCCAAGTCACCCCTGATATTCGTGGTAAGATCGAAGATTATTCTGGCAGAGCTTTCTACAGAAAGCCATATAGACTATGGAGCAAGAGCAAAAACCAAACTGCTGAATTTAATACCACCTTCGTCCTCAATATAGGCAACCAAACTTCCCCAGGAGGTGAAGGCTTGGCCTTTATATTAACCGGAGATCCCACTCTTCCAGAAAACAGTGAAGGAAAATGGCTTGGAATCGTAAATGCTGCAACCAATGGCACTTCTCGACCTGGGATTTTGGCAGTAGAGTTCGACACTAGACAAAACTCTGAGGAAGATGGCCCCAACAGCCATCTTGGTATCAACATCAATAGTATCAACTCCATGACACGTGTTTCATTACCAGACTTGGGGATTAATCTTTCATTAAGTATAGATGTCATGATCAGAGTTCAGTATGCTGGAGATGTAATATCTGTGTTCGGTTCCATGAATAGAAGTGCGGACATGAAGATTCTGTTAACTTCCCCACCTCTCAACCTATCTTCATATCTGCCAGAAGAGATTTTCTTGGGGTTCTCTGCTTCAACAAGTAACTATACAGAGCTTAACTGTGTAAGAGCTTGGGAATTCAACGGCACTCAAATTTCAGATGATGATAAAAAACTGTTGTGGGTTTGGATAACAGTTCCTGCAACATTACTGGTCATCTTAGGTGGGGTGATCTTATTCTTGCTTTTGCAGAGGAAACACCGCAAGGAGATGACAGATGAAGCGTACCCGAGAATAGAGGATCAGATTCAACATGGTTCTATGGCCCCAAAGAAGTTTCGGCTTGAGGAAATAAAAAAAGCAACAGGAAGATTCAGTCCTCAGAACAAGCTTGGGGAAGGTGGTTTTGGAACCGTGTACAAGGGGTCCTTGAGAGGCAACGAGGTGGCTGTGAAAAGAGTCTCCAAGGATTCACGTCAAGGCAAGCAAGAGTTTGTAGCAGAAGTGACCATAATAGGAAGCCTTCATCATAGAAATCTGGTGAAACTGATCGGGTGGTGCTATGAGAGCAGAGAACTGGTCCTTGTCTACGAGTTCATGCCTAATGGGAGCCTAGACAAGTACCTATATGATGATGATGATGAGGAGAAGGAAGAGAAGCTTGGCTGCAAAGATGGATCGATACTTAGCTGGAAAACAAGACACAGTGCCATATATGGGGTGGCTCAGGCGCTAGATTATCTGCATAACGGATGTGAGAAAATGGTGTTTCACAGAGACATAAAAGCCAGCAACATATTGTTGGACTCAGACTTCACTGCCAAGTTGGGAGATTTTGGGTTGGCTCGAATCATTCAAAAGAGAGATGAAACTCACCACTCGACAAAAGGAATTGCAGGAACACCTGGCTACATGGCTCCAGAAACATTCCTTACAGGGAGGGCAACAGTGGAGACTGATGTGTATTCGTTTGGCGTTGTTGTATTGCAAGTTGTTTGTGGGATGAGGCGAGGGAAGCGGTATTCCCAGGTGGATGAGTACAATAATAACATTGTGCACTGGGTGTGGGAGCTTTATGGGAAGGGAAAGTTGCTAGCTGCTGTGGATAGTAGAATAGTAGAGGAAATAGAAGAGGAAAAGGTTCAAGATGTGCTTGTTTTGGGTTTGGCGTGTTGTCATCCAAACCCACACCACAGGCCTTCAATGAGGACTGTTTTGCAGGTTCTTACAGGAGAAGTAGCTCCACCAGAAGTACCAAAGGAAAGACCTGCCTTTGTGTGGCCTGCCTTGCCTCCTTCGTTTACCCTTGACGGGAATAGCTCTACCACAGGAAGCCAACTTGCTCCCTTATTAGGAGACGTGAAGGTCACTGGTAGATGA 1998 0.4429 MFHKYQLQALIFIIVIALAQASSFSFNYPTFQPSDEPSLILSKNSKIYLDAIQVTPDIRGKIEDYSGRAFYRKPYRLWSKSKNQTAEFNTTFVLNIGNQTSPGGEGLAFILTGDPTLPENSEGKWLGIVNAATNGTSRPGILAVEFDTRQNSEEDGPNSHLGININSINSMTRVSLPDLGINLSLSIDVMIRVQYAGDVISVFGSMNRSADMKILLTSPPLNLSSYLPEEIFLGFSASTSNYTELNCVRAWEFNGTQISDDDKKLLWVWITVPATLLVILGGVILFLLLQRKHRKEMTDEAYPRIEDQIQHGSMAPKKFRLEEIKKATGRFSPQNKLGEGGFGTVYKGSLRGNEVAVKRVSKDSRQGKQEFVAEVTIIGSLHHRNLVKLIGWCYESRELVLVYEFMPNGSLDKYLYDDDDEEKEEKLGCKDGSILSWKTRHSAIYGVAQALDYLHNGCEKMVFHRDIKASNILLDSDFTAKLGDFGLARIIQKRDETHHSTKGIAGTPGYMAPETFLTGRATVETDVYSFGVVVLQVVCGMRRGKRYSQVDEYNNNIVHWVWELYGKGKLLAAVDSRIVEEIEEEKVQDVLVLGLACCHPNPHHRPSMRTVLQVLTGEVAPPEVPKERPAFVWPALPPSFTLDGNSSTTGSQLAPLLGDVKVTGR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1969 665 FunFam Probable L-type lectin-domain containing receptor kinase S.5 316 405 - -
Mibi06g1969 665 PANTHER - 53 622 - -
Mibi06g1969 665 Pfam Protein kinase domain 334 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1969 665 ProSitePatterns Protein kinases ATP-binding region signature. 337 358 IPR017441 GO:0005524
Mibi06g1969 665 SUPERFAMILY Protein kinase-like (PK-like) 314 615 IPR011009 -
Mibi06g1969 665 SMART serkin_6 331 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1969 665 FunFam probable L-type lectin-domain containing receptor kinase S.5 406 621 - -
Mibi06g1969 665 Gene3D Phosphorylase Kinase; domain 1 316 405 - -
Mibi06g1969 665 CDD STKc_IRAK 337 617 - -
Mibi06g1969 665 ProSitePatterns Legume lectins beta-chain signature. 142 148 IPR019825 -
Mibi06g1969 665 FunFam Probable L-type lectin-domain containing receptor kinase S.5 23 262 - -
Mibi06g1969 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Mibi06g1969 665 Gene3D Transferase(Phosphotransferase) domain 1 406 621 - -
Mibi06g1969 665 ProSiteProfiles Protein kinase domain profile. 331 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1969 665 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 255 IPR013320 -
Mibi06g1969 665 Pfam Legume lectin domain 24 263 IPR001220 GO:0030246
Mibi06g1969 665 CDD lectin_legume_LecRK_Arcelin_ConA 24 256 IPR001220 GO:0030246
Mibi06g1969 665 Gene3D - 21 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1969 Mibi-ChrMibi06 40234576 40236573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1969 10 629 Receptor kinase-like Gene Family AT5G10530 37.405 1.17e-121 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi06g1969 Pkinase 6.9e-49 CL0016