Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1955 ATGCTTGCTTGTAAAGCACTAGAACATGTTTCATTAAAAGTTGAATGGCAGGGGCACATTCAACAGAGGCGGGGACTAAATGGGGATTTCAATTCTGAGTCTTTCCATCGTTCTCGTCAATATTTTGATGTCAAACAGGCTTGGAATATGGGTGGTGATAGAGGAGATGAAGATTCACCACACATGGGCTCTGCAAAATCACCCACCACCATAATGGGTGGTTTTGAATCCCCAACTTCCGCTTTTTATGCAGCAGAACGATGCATGGGGTTTCCACGATATCATTCCCAAGTTAACATAAATAATAATCCCTCTTTGGCCTCTCCATTTTCTAAGATTCATGATTTGGAACTCCCTATGTACCAGCAATCCCCTAGGGAAAACACCTTCTTGGATCATTCGCCACACCAAGCTAACTTCAATAATGTCGAATTATCAAACACCTTTAGAGCAGTGGGTGGGCCTCAATTTAATCCAGAAAAACCCAATAAAACTCCATGTGGAGATTTGCCAACTGGCAAGTTTCTTCCAACTGAACAGCACAAATTGTTCATTGATGATGATTCTACCTCATTCAGGAGAAATCACACAGTTGGTTCTGGGTCTTACAATTTTCCTGTTTCTCAAGTAAGCTTTTCTTCACAGCAAGAGAAGCTGTGTCCAACAGCTTCAAGTACTGGAAATCCTAGTTCTAGTGGTGGATCAGGACTCTCGAGTAAATCACGCATAAGATGGACTCAGGATCTTCATGAGAAGTTTGTTGAATGTGTGAATCGCCTTGGGGGTGCCGAGAAGGCTACACCAAAAGCGATATTAAAGCTGATGGACACGGATGGGCTGACCATCTTCCATGTAAAGAGTCATCTGCAGAAATATAGAATTGCAAAATACATGCCAGACCCAGCTCAAGGGAAGTCTGACAAAAAAGCTCATATAGACGATGTGCATCATATTGATGTCAAAACTGGCTTGCAAATCAGGGAAGCGCTTCAGCTACAGCTAGATGTTCAGAGGCGTCTCCATGAACAACTAGAGATTCAGAGAAGATTACAGCTTCGAATTGAAGAGCAGGGAAAGCAGCTGAAGATGATGTTTGACCAGCAGCAGAAAACATGTAATGGCTTCTCGGATTTGGGCAATACAGAAAATGATGATCCATCTGTTAGTCATAAAGAGGTTGAGGTTCCAGTTGCTGAAGGTTCTGGAAATTCCTCCTTCCCTTCCAAGATAAGTTAG 1236 0.4264 MLACKALEHVSLKVEWQGHIQQRRGLNGDFNSESFHRSRQYFDVKQAWNMGGDRGDEDSPHMGSAKSPTTIMGGFESPTSAFYAAERCMGFPRYHSQVNINNNPSLASPFSKIHDLELPMYQQSPRENTFLDHSPHQANFNNVELSNTFRAVGGPQFNPEKPNKTPCGDLPTGKFLPTEQHKLFIDDDSTSFRRNHTVGSGSYNFPVSQVSFSSQQEKLCPTASSTGNPSSSGGSGLSSKSRIRWTQDLHEKFVECVNRLGGAEKATPKAILKLMDTDGLTIFHVKSHLQKYRIAKYMPDPAQGKSDKKAHIDDVHHIDVKTGLQIREALQLQLDVQRRLHEQLEIQRRLQLRIEEQGKQLKMMFDQQQKTCNGFSDLGNTENDDPSVSHKEVEVPVAEGSGNSSFPSKIS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1955 411 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 232 388 IPR044848 GO:0003700
Mibi06g1955 411 Pfam MYB-CC type transfactor, LHEQLE motif 324 371 IPR025756 -
Mibi06g1955 411 Pfam Myb-like DNA-binding domain 244 293 IPR001005 -
Mibi06g1955 411 SUPERFAMILY Homeodomain-like 238 294 IPR009057 -
Mibi06g1955 411 Gene3D - 239 298 - -
Mibi06g1955 411 FunFam Myb family transcription factor 239 297 - -
Mibi06g1955 411 MobiDBLite consensus disorder prediction 372 411 - -
Mibi06g1955 411 Coils Coil 327 347 - -
Mibi06g1955 411 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 237 297 IPR017930 -
Mibi06g1955 411 MobiDBLite consensus disorder prediction 216 241 - -
Mibi06g1955 411 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 240 295 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1955 Mibi-ChrMibi06 40080618 40084053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1955 228 404 G2-like Transcription Factor Family AT3G04450 47.283 3.13e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi06g1955 Myb_DNA-binding 1.2e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1955 06 40080618 40084053 Mibi06g1955 06 40080618 40084053 ECH