Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1930 ATGGATTTGAATTCGCACCAGAATTATCAGCCCCAACAACAGCATCAATCCAATTCTGGATTAGCTCGATTTCGCTCTGCACCAAGCTCGCTCTTCGCTAATTTCAGACAATCTGTTGAATCTGTCAAATCCGAGAGACGAATTCCCAGATTCGCTAATAGCAGTAGTAGCTTTCAAGAACTCGAATCCGAACACAAACCATCAAAATCTTCATCGGAAGTTGCTCTGAAACTTATGAATTCCCAGCAAGGTTATAGTGTCGGCGGCTTACCACCTCACTATCCAAGGCATAGTTCTTCTTATAGTTCTTCCATGGATAGCTCCTTTGGACTTGTGGGTTCAATGGGAATGGATCATGAAACTCAGACTAAAAGCTTTGTTTCGCCTCTTCTTAGGCAAAGCAGCTCCCCTGCTGGTCTTTTCTCCAACATCTCATTTCCTAATGGGCATGGCCCCATTAAAGGGGTAAGAAACTATGGTGGGGTGAACGGAAGTAGTAATGATGGACTTACTCCATCTATCAACGGCTTGAAGAATCAGAGTAGTTTCTCATCAAGAAGTACATCACTGGGAGCCCTGTCTCAGATCTCTGAAATAGAATGTGAGGGTATTGGAGCAACAAGCCCAGATGATGGTAGGGTGGGAACTAATAACAGTGGTGATACTCGGTATTATAGCCCAGGCTTCCCTTTTGCTTCCTGGAATGATACCTCACATGTCTCAGAAAATCTCACTGGTTTTAGAAGGGATCACACTAGTAATGGAAAGTTGTATTCTGACGCTCAGAATATTGAGCCTGGAAGTCGGGTTAATGTATTATCGCATCACTTGAGTTTGCCGAAAACCCCATCACATGTGGCTGCTGTGGAAAAGTTTCTTCAATTCCCAGATTCTGTTCCTTGTAAAGTAAGAGCAAAGCGGGGCTGTGCCACTCATCCACGAAGCATAGCCGAAAGGGTTAGAAGAACTCGTATTAGTGAACGAATGAAAAAGTTACAAGATCTTGTCCCGAACATGGACAAGCAAACAAACACAGCTGACATGTTGGACTTGGCCGTTGTGTATATTAAAGATCTTCAGAAACAATTTAAGTCTCTGAGTGAAAAACGGGCAAACTGCAAATGTACGAGCACGCAGAAAACAGATGCAAAGTGA 1155 0.4346 MDLNSHQNYQPQQQHQSNSGLARFRSAPSSLFANFRQSVESVKSERRIPRFANSSSSFQELESEHKPSKSSSEVALKLMNSQQGYSVGGLPPHYPRHSSSYSSSMDSSFGLVGSMGMDHETQTKSFVSPLLRQSSSPAGLFSNISFPNGHGPIKGVRNYGGVNGSSNDGLTPSINGLKNQSSFSSRSTSLGALSQISEIECEGIGATSPDDGRVGTNNSGDTRYYSPGFPFASWNDTSHVSENLTGFRRDHTSNGKLYSDAQNIEPGSRVNVLSHHLSLPKTPSHVAAVEKFLQFPDSVPCKVRAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMDKQTNTADMLDLAVVYIKDLQKQFKSLSEKRANCKCTSTQKTDAK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1930 384 Coils Coil 356 376 - -
Mibi06g1930 384 FunFam Transcription factor bHLH130 family 310 379 - -
Mibi06g1930 384 MobiDBLite consensus disorder prediction 1 23 - -
Mibi06g1930 384 Gene3D - 310 382 IPR036638 GO:0046983
Mibi06g1930 384 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 309 359 IPR011598 GO:0046983
Mibi06g1930 384 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 312 374 IPR036638 GO:0046983
Mibi06g1930 384 SMART finulus 315 365 IPR011598 GO:0046983
Mibi06g1930 384 Pfam Helix-loop-helix DNA-binding domain 314 360 IPR011598 GO:0046983
Mibi06g1930 384 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 25 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1930 Mibi-ChrMibi06 39824983 39827085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1930 1 364 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 46.997 9.50e-88 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi06g1930 HLH 2.2e-09 No_clan