Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1924 ATGGCCACTTCATTCTGTACATACCTGTTCCTTCTCTCTGTGACCTTCACAACCTTCAATCTTGGTTCATCTTCTTCCTCAGAGGCGGACATTCTTCTTTCCTTTAAGGCCTCCATTGAAGACTCTAGGAAGGCTCTCTCAAGCTGGTCCAACACTTCGTCCACTCATTACTGTAACTGGACTGGGATTTCCTGCTCCACCACTTCTTCTCCTTCTCTATCTGTCACTTCCATTAATCTTCAGAACTTGAACCTTTCTGGGGACCTCTCACCTTCAATATGTGATCTCCCAAATCTGTCATACCTAAATCTTGCTGATAATATATTCAACCAGCCCATCCCTCTTCATCTTTCTCAGTGTAGTTCGTTGGAGACTTTGAATCTTAGTAATAATCTCATATGGGGAACCATCCCAATGCAGATTTCTCAGTTTGGTTCTTTGAGAGTGCTTGATTTCAGCAGAAATCACATAGAAGGAGATATTCCAGAAAGCTTGGGCTCCCTCAAGAACCTCCAAGTTCTTAACATGGGAAGTAACCAACTATCAGGTGATGTGCCTGCTATCTTCATGAATTTAACTGAGCTTGTCGTTCTTGACTTGTCTGAAAATCCATACTTGGAAAGTGAGATTCCTGAGAGTATAGGCAAACTTGGAAGTCTCAAGCAACTTCTGCTGCAAAGTTCTGGTTTTCACGGAGAAATTCCGGATTCTTTTGTAAACCTGCTTACTTTGACCCATTTAGACCTCTCTCAGAACAACCTTACAGGTGAGATTTCTCAGGGTCTGGTGTCTTCTCTTAAGAACCTGGTGTCTTTTGATGTTTCACAGAACAAGCTTTCGGGGTCATTTCCAAATGGCATTTGCAATGCAAAAGGTCTCATAAATCTCAGTCTCCATACAAATACTTTCAGTGGTTCACTGCCCAACACCACTGGTGAATGTAAGAATCTTGAGAGATTTCAAGTTCAGAACAACGAGTTAACTGGTGACTTCCCTACTTCATTATGGTCATTACCTAAAGTTAAGCTCATTAGAGCTGAAAACAACAGGTTCTCAGGACAAATACCTGAATCCATCTCGGGAGCTGTTCAGTTGGAGCAAGTTCAGCTTGACAACAACAGCTTTGCTGGTAAAATTCCTCAGAGTCTTGGGTTGGTCAAGAGCTTATACAGATTCTCTGCGTCTCTCAATCGTTTCTATGGAGAACTTCCAGTAAACTTTTGTGATTCCCCTGTTATGAGTATTGTGAATCTCTCTCACAATTCCCTTTCTGGTCAAATCCCAGAGCTGAAAAAATGCAGGAAACTGGTTTCATTGTCTCTAGCAGACAATAGTCTTACTGGACAAATCCCTCCTTCACTTGCTGAGTTGCCAGTGCTAACTTATCTTGATCTTTCAGCTAACAATCTCACTGGTTCAATCCCACTAGGACTTCAAAATTTAAAGCTTGCTCTTTTCAATGTGTCCTTCAATCAGCTATCTGGTAAGGTGCCTTACTCATTGATTTCTGGTCTCCCTGCCTCATTTTTGGAAGGAAACCCTGAGCTTTGTGGCCCTGGATTGCCCACTTCCTGTTCTGATGACCCTCCAATGCACCATTCCGGGGGTCTCACCGCCCTAGCATGTGCCCTTATCTCTGTAGCCTTCGTTGTAGGAACTGCCATGTTTGTTGGTGGATATATTTTGTATAGGAGGTCTAGCAAGAGGAATCAAATAGGTGTTTGGCGCTCTGTGTTCTTCTATCCTCTTAGAATTACTGAGCAAGATCTTCTTATAGGAATGGACGAGAAAAGCTTGATTGGAAATGGTGGGGTTTTTGGCAAAGTTTATGTTGTGAGTTTACCCAGCGGTGAACAAGTGGCTGTAAAGAAGCTAGTCAATTTTGGGAACCAGACGTCAAAAAGTTTGAAAGCTGAGGTCAAGACATTGGCTAAGATTAGGCATAAGAATGTTGTAAAAATCCTGGGGTTTTGCCATTCTGATGAGTCAATCTTTCTCATTTATGAGTACATGCAAGAAGGAAGCTTAGGGGACTTGATTTCCCGTGAGAATTTTGAGTTGCAGTGGGAGGCAAGATTGAGGATTGCCATCAGGGTAGCTCAAGCACTTGCTTATCTTCACAAAGACTATGTTCCTCACTTGCTTCACAGAAACGTCAAGTCCAGGAACATTCTGCTGGATGCAAACTTTGAGCCAAAACTCACAGATTTTGCTCTTGATCGAATTGTGGGAGAAGCCGCATTTCAATCAACTGTTGCTTCTGAAGCAGCATCTTCCTGCTATAATGCTCCAGAATGTGGGTACAGTAAGAAAGCAACTGAAGAATTGGACATATACAGCTATGGTGTTGTATTGCTAGAGCTTGTGACAGGGAAGCAAGCAGAGCAAACGGTATCAACTGAGTCTCTTGACATAGTGAAGTGGGTACGAAGGAGAGTGAACATCACGGATGGGGTGAATCAAGTGCTTGATCCCAAAATATCACATTCCAATCAGCAACAAATGGTTGGAGCTCTGGAAATCGCTCTTCAATGCACTTCCGTGGTGCCTGAAAAAAGACCATCGATGGTAGAAGTTGTACGAGCTCTTCAGTCCCTTGAGTCACAAACCATCGCTGCAAATTCTCAGGATTTGAATGAGGAACCTTCGATTCCTATATGA 2661 0.4284 MATSFCTYLFLLSVTFTTFNLGSSSSSEADILLSFKASIEDSRKALSSWSNTSSTHYCNWTGISCSTTSSPSLSVTSINLQNLNLSGDLSPSICDLPNLSYLNLADNIFNQPIPLHLSQCSSLETLNLSNNLIWGTIPMQISQFGSLRVLDFSRNHIEGDIPESLGSLKNLQVLNMGSNQLSGDVPAIFMNLTELVVLDLSENPYLESEIPESIGKLGSLKQLLLQSSGFHGEIPDSFVNLLTLTHLDLSQNNLTGEISQGLVSSLKNLVSFDVSQNKLSGSFPNGICNAKGLINLSLHTNTFSGSLPNTTGECKNLERFQVQNNELTGDFPTSLWSLPKVKLIRAENNRFSGQIPESISGAVQLEQVQLDNNSFAGKIPQSLGLVKSLYRFSASLNRFYGELPVNFCDSPVMSIVNLSHNSLSGQIPELKKCRKLVSLSLADNSLTGQIPPSLAELPVLTYLDLSANNLTGSIPLGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNPELCGPGLPTSCSDDPPMHHSGGLTALACALISVAFVVGTAMFVGGYILYRRSSKRNQIGVWRSVFFYPLRITEQDLLIGMDEKSLIGNGGVFGKVYVVSLPSGEQVAVKKLVNFGNQTSKSLKAEVKTLAKIRHKNVVKILGFCHSDESIFLIYEYMQEGSLGDLISRENFELQWEARLRIAIRVAQALAYLHKDYVPHLLHRNVKSRNILLDANFEPKLTDFALDRIVGEAAFQSTVASEAASSCYNAPECGYSKKATEELDIYSYGVVLLELVTGKQAEQTVSTESLDIVKWVRRRVNITDGVNQVLDPKISHSNQQQMVGALEIALQCTSVVPEKRPSMVEVVRALQSLESQTIAANSQDLNEEPSIPI 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1924 886 Gene3D Ribonuclease Inhibitor 189 266 IPR032675 -
Mibi06g1924 886 FunFam - 589 670 - -
Mibi06g1924 886 Gene3D Ribonuclease Inhibitor 267 528 IPR032675 -
Mibi06g1924 886 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 671 871 - -
Mibi06g1924 886 ProSiteProfiles Protein kinase domain profile. 595 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1924 886 SUPERFAMILY RNI-like 210 504 - -
Mibi06g1924 886 Gene3D Ribonuclease Inhibitor 25 188 IPR032675 -
Mibi06g1924 886 SUPERFAMILY L domain-like 25 289 - -
Mibi06g1924 886 SMART LRR_typ_2 266 290 IPR003591 -
Mibi06g1924 886 SMART LRR_typ_2 241 265 IPR003591 -
Mibi06g1924 886 SMART LRR_typ_2 96 120 IPR003591 -
Mibi06g1924 886 SMART LRR_typ_2 144 167 IPR003591 -
Mibi06g1924 886 SMART LRR_typ_2 457 480 IPR003591 -
Mibi06g1924 886 SMART LRR_typ_2 192 217 IPR003591 -
Mibi06g1924 886 SMART LRR_typ_2 168 191 IPR003591 -
Mibi06g1924 886 Gene3D Transferase(Phosphotransferase) domain 1 672 883 - -
Mibi06g1924 886 PRINTS Leucine-rich repeat signature 244 257 - -
Mibi06g1924 886 PRINTS Leucine-rich repeat signature 457 470 - -
Mibi06g1924 886 Pfam Leucine rich repeat 219 279 IPR001611 GO:0005515
Mibi06g1924 886 Pfam Leucine rich repeat 146 203 IPR001611 GO:0005515
Mibi06g1924 886 SUPERFAMILY Protein kinase-like (PK-like) 597 863 IPR011009 -
Mibi06g1924 886 FunFam Leucine-rich repeat family protein 27 186 - -
Mibi06g1924 886 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Mibi06g1924 886 Pfam Protein tyrosine and serine/threonine kinase 601 863 IPR001245 GO:0004672|GO:0006468
Mibi06g1924 886 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 865 - -
Mibi06g1924 886 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 265 528 - -
Mibi06g1924 886 Gene3D Phosphorylase Kinase; domain 1 600 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1924 Mibi-ChrMibi06 39760975 39763758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1924 32 866 Receptor kinase-like Gene Family AT5G06940 65.119 0.0 1071
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi06g1924 PK_Tyr_Ser-Thr 2.4e-41 CL0016