Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1915 ATGGAGTTGTGGCTGAAATCCGCGACCCAGCCGTACTACTTTCGAGCACAGAGGTCCGATCCTCTCTCATTGGCGGACTCCAGCCCTCTTTCCAACCCCATTTATTTCACCCCACCGCCTCTCCCGGTTCCCCTTCCTCCTCTTTCTCACCTACCCACTCACCTTCTTTCCACCTCCCCAGCCGGTACCCCTTCCTCCTTTCATCGCGAGCATAGGAAATGCAGAAAGCAGAAGAAGCTCTCTTGCTCCCTCCTCTTTTCTCACGATCTCATCCCTCTCTATTCTTTTCTCCTTCTCAATCTATACATCCTTAGTTTGAACCTCTTATTTAGCTGTTGTTGTCGAGATCTATTGACCTATGGGTTTGCTCTCTCTTTCTCTCTCAGTCAATGGCCGCTTAATCTCCTGCAAATGAAAGCATGTGCTGTGATTTTGGAGCTGTTAAAGCTAGCATCGTCTCCAGCAACACCTTTAACTTTGTCAAGCTCTACTCCACCTCCAAACGGGAAGATGAATCACTTGACTGTGGAAACTGAAGATAGTTTTGCAAGCCTGCTTGACCTTGCAGCTAATAATGACGTTGAGCATTTCAAAAGATCGATTGAACTTGATCCTTCCTCTGTAGATGATGTTGGACTGTGGTATAGTCGCCAGAAGGGGTCAAAGCAGATGGTCAACGAGCACCGGACACCTTTAATGGTTGCTGCTACTTATGGTAGCATTGATGTCATCAAGTTGATTCTCTCATTATCTGATGCAGATATTAATAGGTCATGTGGGCTTGACAAAAGCACAGCCCTTCATTGTGCAGCATCAGGCGGGGCTGTAAATGCTGTTGATGTGGTGAAACTGCTTCTGGCAGCTGGTGCTGATCCGAATTCTGTTGATTCCAATGGTCACTATCCAGTTGATGTTATCGTGGTACCTCCCCCGCTCGCACATGTGAAAAGTATTCTCGAAGAACTTCTTCAAACAGATTGTTCCATGGCAGGGTGTGGTCTTAGGGTGGTAACAGCTACAACAAATTCAAACTCTCCCCCTCCATCAACTTCTCCGGAGAATGGGTCTCCTTCTATGCTGGATTTTGATTTGAAGCTAAAGTTAAAGGAATCTAATGCTTTCTCTGCCTCAGAGAAGAAAGAATATCCTGCTGATCCATCTCTTCCTGATATAAAAAACAGCATCTACTCCACTGATGAGTTCCGAATGTATTCTTTCAAGGTTCGACCATGTTCACGTGCATATTCACATGATTGGACTGAGTGCCCTTTTGTCCACCCCGGGGAAAATGCTCGGAGGAGGGACCCGAGGAAGTTTCATTATAGCTGTGTCCCTTGTCCTGATTTTCGGAAAGGAGCTTGCCGTCGTGGAGATATGTGTGAATATGCTCATGGTGTTTTTGAGTGCTGGCTGCATCCAGCTCAATATCGGACCCGCCTCTGCAAGGATGGGACCAGTTGCTCTAGAAGAGTTTGCTTCTTTGCCCATACAGCTGAGGAGCTTAGGCCGTTGTATGTTTCAACTGGTTCTGCTGTTCCATCACCACGCTCAAGCACATCTTCTGCCATGGATTTTGCTGCAGCCATGAGCATGTTACCAGGCTCCCCTTCTTCAATGTCTGTAATGTCTCCTTCACCGTTCACTCCACCTATGTCACCATCTGCCACTGGCATGTCACACTCTTCCGTTGCTTGGCCTCAACCTAATGTTCCAAACCTGCATCTGCCAGGAAGTAATATTCACTCCAGTCGTTTGAGATCTTCACTCAATGCTAGAGATATCCCTGTAGAAGACTTTGATCTGTTGCCTGACTACGATGTTCAGCAACACCAGCTACTTAATGAGATGGCTTGCATTTCCCAGCAATCTATGAATTCTAATAACCTGAACCGCTCTGGTCGTATGAAGACCCTGACCCCTTCAAATCTTGATGATCTCTTTTCTGCTGAAAGTTCTTCCCCTCGGTTTGCTGATCCAACATTGAATTCAGCTGTCTTTTCACCCACACACAAATCAGCCGTCTTTAATCAATTTCAGCAGCAGCAAAGCTTGCTTTCACCCGTGAATACTAATTTTTCTTCCAAGAATGTTGACCATCCTTTGTTACAGGCCTCATTCCAAAACTCGGGAAGGATGTCTCCACGTAATGTGGAACCTATCTCACCAATTAGCTCTAGGCTTTCCATGCTATCTCAACGTGATAAGCTGCAACAGTTTCGTAGCCTTAGCTCTCGTGATCTTGGCTCCAACTCTGCTGCTGCTGTTGCTGCTGCAGGTTACAATGACAACCCTTGGTCAGAATGGGGATCTGGCAATGGTAAATTGGATTGGGCTGTCAGTTCTGATGAATTGGGCAGGCTTCGTAGATCGTCGTCGTTTGAGTTTGGGAGCAATGGTGAGGAGCCGGATTTATCATGGGTGCAGTCACTTGTTAAAGAATCTCCAACTGAGATTAAGGAGAAATTGGGAACAGCTGCCTCAAGTGTTGCAGCGGCTGCGTACTCTGGTGAGGGATCGAATTTGAGCACTCAGATGTGA 2538 0.4669 MELWLKSATQPYYFRAQRSDPLSLADSSPLSNPIYFTPPPLPVPLPPLSHLPTHLLSTSPAGTPSSFHREHRKCRKQKKLSCSLLFSHDLIPLYSFLLLNLYILSLNLLFSCCCRDLLTYGFALSFSLSQWPLNLLQMKACAVILELLKLASSPATPLTLSSSTPPPNGKMNHLTVETEDSFASLLDLAANNDVEHFKRSIELDPSSVDDVGLWYSRQKGSKQMVNEHRTPLMVAATYGSIDVIKLILSLSDADINRSCGLDKSTALHCAASGGAVNAVDVVKLLLAAGADPNSVDSNGHYPVDVIVVPPPLAHVKSILEELLQTDCSMAGCGLRVVTATTNSNSPPPSTSPENGSPSMLDFDLKLKLKESNAFSASEKKEYPADPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCSRRVCFFAHTAEELRPLYVSTGSAVPSPRSSTSSAMDFAAAMSMLPGSPSSMSVMSPSPFTPPMSPSATGMSHSSVAWPQPNVPNLHLPGSNIHSSRLRSSLNARDIPVEDFDLLPDYDVQQHQLLNEMACISQQSMNSNNLNRSGRMKTLTPSNLDDLFSAESSSPRFADPTLNSAVFSPTHKSAVFNQFQQQQSLLSPVNTNFSSKNVDHPLLQASFQNSGRMSPRNVEPISPISSRLSMLSQRDKLQQFRSLSSRDLGSNSAAAVAAAGYNDNPWSEWGSGNGKLDWAVSSDELGRLRRSSSFEFGSNGEEPDLSWVQSLVKESPTEIKEKLGTAASSVAAAAYSGEGSNLSTQM 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1915 845 PANTHER UNKEMPT FAMILY MEMBER 187 814 IPR045234 -
Mibi06g1915 845 Pfam Ankyrin repeats (3 copies) 223 296 IPR002110 GO:0005515
Mibi06g1915 845 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 445 465 IPR000571 GO:0046872
Mibi06g1915 845 SUPERFAMILY Ankyrin repeat 181 307 IPR036770 -
Mibi06g1915 845 ProSiteProfiles Ankyrin repeat region circular profile. 262 296 - -
Mibi06g1915 845 PRINTS Ankyrin repeat signature 228 243 IPR002110 GO:0005515
Mibi06g1915 845 PRINTS Ankyrin repeat signature 281 295 IPR002110 GO:0005515
Mibi06g1915 845 ProSiteProfiles Ankyrin repeat profile. 262 297 IPR002110 GO:0005515
Mibi06g1915 845 ProSiteProfiles Zinc finger C3H1-type profile. 445 467 IPR000571 GO:0046872
Mibi06g1915 845 SMART ANK_2a 262 294 IPR002110 GO:0005515
Mibi06g1915 845 SMART ANK_2a 227 257 IPR002110 GO:0005515
Mibi06g1915 845 MobiDBLite consensus disorder prediction 541 562 - -
Mibi06g1915 845 SMART c3hfinal6 475 498 IPR000571 GO:0046872
Mibi06g1915 845 SMART c3hfinal6 440 466 IPR000571 GO:0046872
Mibi06g1915 845 Gene3D - 178 328 IPR036770 -
Mibi06g1915 845 FunFam Zinc finger CCCH domain-containing protein 66 398 466 - -
Mibi06g1915 845 Gene3D - 440 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1915 Mibi-ChrMibi06 39648071 39652692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1915 176 814 C2H2 Transcription Factor Family AT5G12850 56.116 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi06g1915 Ank_2 6.6e-10 CL0465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1915 06 39648071 39652692 Mibi06g1915 06 39648071 39652692 ECH