Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1912 ATGAAGCCAGAATTGGACCATTCTGAAGCAAATATCAGAAGCAATCATAAGGTGTATGTGACCTGTACTTCTCAAGCTCAGAGGCATGGCATGGTCATGGAAGATGGTGAAACTAATGAAGAACATCAACAAACGCAACTTCCTTTCCTTAGCATGCCTTCAACAACAAATAAATTTTTTGCCCAACCATCATCACAGTTGGAGTTTGTTGAACCCTCAATGGCATGTGCCCCTCACCAATATTTAGGTCCCAATTATGTAGGAGTGACCTCAAGTCATGGACCTCAGCCTCTGGTGCATCCTCATGGTCTAGGAGTGCATACCGCCCAAACGGTCTTACCACTGGAAATTAAAGAGGAGCCTGTTTATGTTAATGCCAAGCAATATCATGGAATTTTGAGGCGTAGGCGATTACGTGCCAAGGCTGAGATGGAAAAGAAGCTGATCAAAGGAAGGAAGCCTTACCTTCACGAGTCTCGACATTTGCATGCAATGAGAAGAGCCAGAGGATGTGGTGGCCGTTTCCTAAACACAAAGAAACTTGGCAATGATACAGCTTGTGCCAACACTACGAGAACCAACAAGGAGGATGCTCCTGCTACTTCTGACCTTAATGGTGCACTTTCTCTTGATTCAAACTCTTCTTCTTGTGATAAAAACAAACACTGCTCACACGTTCAGGGATTTCATCTTGATGGCGACTTCTCCACACACAAGTCATCTAAAACGCTCAACCACACTGGGGTTGGCAGAGTCCTCGCCATTAATTAA 771 0.4449 MKPELDHSEANIRSNHKVYVTCTSQAQRHGMVMEDGETNEEHQQTQLPFLSMPSTTNKFFAQPSSQLEFVEPSMACAPHQYLGPNYVGVTSSHGPQPLVHPHGLGVHTAQTVLPLEIKEEPVYVNAKQYHGILRRRRLRAKAEMEKKLIKGRKPYLHESRHLHAMRRARGCGGRFLNTKKLGNDTACANTTRTNKEDAPATSDLNGALSLDSNSSSCDKNKHCSHVQGFHLDGDFSTHKSSKTLNHTGVGRVLAIN 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1912 256 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 23 222 IPR001289 GO:0003700|GO:0006355
Mibi06g1912 256 ProSitePatterns NF-YA/HAP2 subunit signature. 123 143 IPR018362 GO:0003677|GO:0016602
Mibi06g1912 256 PRINTS CCAAT-binding transcription factor subunit B signature 121 143 IPR001289 GO:0003700|GO:0006355
Mibi06g1912 256 PRINTS CCAAT-binding transcription factor subunit B signature 152 175 IPR001289 GO:0003700|GO:0006355
Mibi06g1912 256 ProSiteProfiles NF-YA/HAP2 family profile. 118 178 IPR001289 GO:0003700|GO:0006355
Mibi06g1912 256 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 120 175 IPR001289 GO:0003700|GO:0006355
Mibi06g1912 256 SMART cbf3 117 178 IPR001289 GO:0003700|GO:0006355
Mibi06g1912 256 Gene3D - 118 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1912 Mibi-ChrMibi06 39598468 39603545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1912 20 192 CCAAT-HAP2 Transcription Factor Family AT5G12840 43.429 1.94e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Mibi06g1912 CBFB_NFYA 7.2e-26 No_clan