Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1903 ATGCCTCTGCTCTTAGCATGCAGGGGAGGGTTGGAATCAAGAACCATAGGGCAGAAGCTAAAAACGAAAAGCAGTGGATATTTGAGTAATCCGTTAAAGGAAGTTGTTGCTTCTTCACTTTCCCGTTCTGCGATCATTTTCTCTGTTGCTGCTGGTGAACGTTGTACGATGATGGAAATTCTGCGCATGTTGTGTCTTGTGTTTGCTTGGTATGTGTCAAAATCTGTTCTTTTTGTTGTGGGTGATGAGCTACAGGATCAAACTATATTGCTTGCCCTTAACCAAGAGCTTAAAGTACCAAGATGGGACGCCAACAACTCTAGTCACTGCTCGTGGCAAGGCGTTAGCTGCAATGACCGCTCAGTGGTAGTGAAGCTTGATCTGTCTCATGCAAATCTTCGAGGTAATGTCACTCTAGTGTCCCAGCTCAAAGCTCTTAGGCAGCTTGACCTTTCAAATAACAATTTTCATGGTTACATTCCTCCTGCTTTTGGAAATTTATCTGATCTTGAAGTTCTCGATTTGTCTTCAAATAAGTTCGAAGGTTCAATTCCACCAGAGTTGGGCGGCCTTAGAAATCTTGTATCGTTAAACCTTTCAAACAACTTGCTTGTGGGGAAAATACCAAGTGAACTTCATGGCCTAGAGAAATTGCAGGAGTTTCAAGTCTCCAGTAATCAACTGAATGGATCTCTACCTACTTGGGTGGGAAACTTAACCAATCTGAGAGTTTTGGCAGCCTATGAGAACCTTCTAGGTGGCATGATTCCGGATAATCTTGGCTCGGCTTCTGAGCTTGAGATTCTTAACCTGCATTCAAACCAGCTTGAAGGCCCTATACCAGCAAGCATTTTTACTTCAGGGAAGCTGGAAGTTCTGGTTCTGACCCAGAACAATTTAAGTGGTGATCTTCCTCTAGAACTAGGAAATTGCCAAGGCCTTTCCAATATCCGAATTGGGAACAACCATCTAGTAGGTTCTATTCCTAAGACCATAGGAAACCTTAGTAGTCTGACCTACTTCGAAGCGGACAATAACAATCTTTCTGGTGCGGTAGTGTCTGAGTTTTCTCAGTGTTCTAATCTCACCCTTCTCAACTTAGCTTCAAATGGATTCAGTGGAACGATTCCACCCGAACTTGGACAGCTTATGAACCTGCAGGAATTAATTCTTTCTGGAAATAACCTTACTGGAAATATTCCAGAATCAATTTTGAGGTGCAGGAATCTTAACAAGCTTGATATAAGCAATAACAGGTTCAATGGAACACTACCTAATGACATCTGCAAATTGTCTAGGCTGCAATTCTTGCTACTGGGTCAGAATTCCATAGGAGGGGAGATCCCTCATGAAATTGGAAATTGTGCAAAACTTCTTGAGTTGCAATTGGGCAGTAACTATTTGACAGGAATTATCCCTTTTGAGATTGGTCACATTAGGAACTTGCAGATTGCTTTAAATTTGAGTTTCAATCATCTTCATGGATCACTGCCTCCTGAGTTAGGAAGACTGGACAAACTTGTCGCTCTGGATGTTTCGAACAACAGGCTCACAGGAAATATCCCAGCCGAGCTGAAGGGTATGCTGAGCTTGATAGAGGTTAACTTTTCAAATAATTTGCTCGGCGGCCCAGTACCAACATTTGTGCCATTCCAAAAGAGTCCCAATTCAAGTTTTATGGGTAATAAAGGGCTCTGTGGAGAGCCATTAAATTCTTCATGTGATCTTTACGATGACGGCAGTAACTACCATCACAGAGTTTCTTACAGAATCATACTTGCGGTAATTGGCTCTGGTTTGGCAGTTTTTATGTCAGTTACTGTGGTGGTCTTGCTGTTTATGATTAGAGAGAGGCAAGAAAAAGCAGCCAAAGATGCTGGGTTGGTTGAGGACGAAACTAATAACCAACCAACCATAGTAGCAGGGAATGTCTTTGTTGAGAATCTGAGACAAGCAGTAGACCTTGATGCTGTTGTTAAGGCAACCCTTAAAGATTCTAATAAGCTCAGCAGTGGCACTTTCAGTACAGTTTACCAGGCAGTCATGCCTTCTGGGATGGTTTTATCTGTTAGGAGACTCAAGTCCATGGATAAGACCATAATCCACCACCAAAACAAGATGATTAGGGAACTTGAGAGGCTGAGCAAACTTTGTCATGACAATCTGGTGCGACCCATTGGATATGTTATTTATGAAGATGTTGCTCTTCTCTTGCATCATTTCTTACCCAATGGAACATTGGCTCAGTTTCTTCATGAATCAAGCAAGCAACCTGAATATCAACCCGACTGGCCTACTAGATTATCCATCGCCATCGGTGTGGCAGAAGGTCTGGCTTTCCTGCATCATGTGGCAATTATCCACCTTGACATTTCTTCTGGCAATGTTCTTTTGGATGCGAATTTCAAGCCTTTGCTTGGGGAGATTGAGATTTCAAAACTCCTCGATCCAACCAGAGGTACCGCTAGTATTAGTGCTGTTGCTGGTTCCTTTGGATACATACCACCAGAATATGCATATACAATGCAAGTTACAGCACCTGGCAATGTCTACAGTTATGGTGTAGTTCTACTTGAGATTCTGACTACACGACCCCCGGTTGATGAGGAATTCGAAGAAGGCATAGATTTGGTGAAATGGGTTCACAGTGCTCCAGTAAGAGGGGAAACTCCAGAGCAGATACTCGACGCAAGGCTTAGCACAGTATCATTTGGTTGGAGGAAAGAAATGCTTGCCGCTTTGAAGGTTGCATTGCTCTGCACTGATACTACGCCTGCGAAACGACCTAAGATGAAGAAGGTAGTGGAAATGCTGCAAGAAATAAGGCAAAACTGA 2835 0.4289 MPLLLACRGGLESRTIGQKLKTKSSGYLSNPLKEVVASSLSRSAIIFSVAAGERCTMMEILRMLCLVFAWYVSKSVLFVVGDELQDQTILLALNQELKVPRWDANNSSHCSWQGVSCNDRSVVVKLDLSHANLRGNVTLVSQLKALRQLDLSNNNFHGYIPPAFGNLSDLEVLDLSSNKFEGSIPPELGGLRNLVSLNLSNNLLVGKIPSELHGLEKLQEFQVSSNQLNGSLPTWVGNLTNLRVLAAYENLLGGMIPDNLGSASELEILNLHSNQLEGPIPASIFTSGKLEVLVLTQNNLSGDLPLELGNCQGLSNIRIGNNHLVGSIPKTIGNLSSLTYFEADNNNLSGAVVSEFSQCSNLTLLNLASNGFSGTIPPELGQLMNLQELILSGNNLTGNIPESILRCRNLNKLDISNNRFNGTLPNDICKLSRLQFLLLGQNSIGGEIPHEIGNCAKLLELQLGSNYLTGIIPFEIGHIRNLQIALNLSFNHLHGSLPPELGRLDKLVALDVSNNRLTGNIPAELKGMLSLIEVNFSNNLLGGPVPTFVPFQKSPNSSFMGNKGLCGEPLNSSCDLYDDGSNYHHRVSYRIILAVIGSGLAVFMSVTVVVLLFMIRERQEKAAKDAGLVEDETNNQPTIVAGNVFVENLRQAVDLDAVVKATLKDSNKLSSGTFSTVYQAVMPSGMVLSVRRLKSMDKTIIHHQNKMIRELERLSKLCHDNLVRPIGYVIYEDVALLLHHFLPNGTLAQFLHESSKQPEYQPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLLGEIEISKLLDPTRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRPPVDEEFEEGIDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDTTPAKRPKMKKVVEMLQEIRQN 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1903 944 ProSitePatterns Tyrosine protein kinases specific active-site signature. 786 798 IPR008266 GO:0004672|GO:0006468
Mibi06g1903 944 Coils Coil 935 944 - -
Mibi06g1903 944 SMART LRR_typ_2 264 287 IPR003591 -
Mibi06g1903 944 SMART LRR_typ_2 383 407 IPR003591 -
Mibi06g1903 944 SMART LRR_typ_2 431 455 IPR003591 -
Mibi06g1903 944 SMART LRR_typ_2 143 166 IPR003591 -
Mibi06g1903 944 SMART LRR_typ_2 191 214 IPR003591 -
Mibi06g1903 944 SMART LRR_typ_2 167 190 IPR003591 -
Mibi06g1903 944 SMART LRR_typ_2 215 239 IPR003591 -
Mibi06g1903 944 Gene3D Transferase(Phosphotransferase) domain 1 742 944 - -
Mibi06g1903 944 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 64 940 - -
Mibi06g1903 944 SUPERFAMILY Protein kinase-like (PK-like) 663 941 IPR011009 -
Mibi06g1903 944 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 742 944 - -
Mibi06g1903 944 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 283 578 - -
Mibi06g1903 944 ProSiteProfiles Protein kinase domain profile. 663 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1903 944 Gene3D Ribonuclease Inhibitor 336 404 IPR032675 -
Mibi06g1903 944 SUPERFAMILY L domain-like 256 566 - -
Mibi06g1903 944 Pfam Protein tyrosine and serine/threonine kinase 666 938 IPR001245 GO:0004672|GO:0006468
Mibi06g1903 944 Pfam Leucine rich repeat N-terminal domain 88 118 IPR013210 -
Mibi06g1903 944 Gene3D Ribonuclease Inhibitor 485 576 IPR032675 -
Mibi06g1903 944 Gene3D Ribonuclease Inhibitor 83 231 IPR032675 -
Mibi06g1903 944 Gene3D Ribonuclease Inhibitor 405 484 IPR032675 -
Mibi06g1903 944 Pfam Leucine rich repeat 145 204 IPR001611 GO:0005515
Mibi06g1903 944 Pfam Leucine rich repeat 385 444 IPR001611 GO:0005515
Mibi06g1903 944 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 633 741 - -
Mibi06g1903 944 Gene3D Ribonuclease Inhibitor 232 331 IPR032675 -
Mibi06g1903 944 FunFam Leucine-rich repeat receptor-like kinase 86 186 - -
Mibi06g1903 944 CDD STKc_IRAK 669 941 - -
Mibi06g1903 944 SUPERFAMILY L domain-like 99 351 - -
Mibi06g1903 944 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 187 280 - -
Mibi06g1903 944 Gene3D Phosphorylase Kinase; domain 1 627 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1903 Mibi-ChrMibi06 39510968 39515844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1903 58 943 Receptor kinase-like Gene Family AT2G41820 72.360 0.0 1282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi06g1903 PK_Tyr_Ser-Thr 3.2e-27 CL0016