Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1897 ATGGCTTCTTCTTCCTCTGATCCTCCTTCAAAATTCGAACTTGGCTCCTCCATGGCACTCTCCTCGGAAGCTGCCACCACCAGCGATCAGGTGTTTCTATACAGGGATTTCAAGAAACCCAAGAAAGAAAGGGGATGTACGGCCAAAGAGCGAATCAGCAAAATGCCTCCTTCCACTGCTGGTAAACGTAGCTCCATATATCGTGGTGTAACCAGGCATAGATGGACTGGTCGTTATGAAGCACATCTCTGGGATAAGAGCACGTGGAATCAAAATCAGAATAAGAAAGGAAAGCAAGTTTACTTGGGGGCATATGATGATGAAGAGGCTGCGGCTAGAGCTTATGACCTTGCTGCTCTCAAATATTGGGGTCCTGGGACTCTCATCAATTTTCCAGTGTCTGATTATACAAGAGATCTTGAAGAAATGCAGAATTTTTCAAGAGAAGAATACCTAGCATCTTTACGAAGGAAGAGCAGTGGCTTTTCAAGAGGAATCTCCAAATATCGCGGACTCTCCAGTCGATGGGAACCATCATATGGTCGCATGGCTGGATCTGACTACTTCGATAGCTTACATTATGGTACAGGTGATGATTCTGCTGCAAAAAGTGAATATTTAAGTGGTTTCAGTGTAGATAGAAAGATTGATTTAACAAGTTACATCAAATGGTGGGGATCTAATAAGAGTCGCCAAGCTGATGCTGGAATGAAATCATCAGAAGAAAAAAAGTGCGGTTTCGCTGGAGATCATTGCAGTGAACTCAGAACATTGGAACAGCAAGTACAACCCACTGAACCATATCAGATGCCACAATTAGGCACGTCCCATGATGAAAAAAAGCATAAGAATAGTTCAGTTTCTGCCTTAAGTATCCTATCTCGATCAGCTGCCTACAAAAGTTTGCTAGAGAAAGCATCAAAGAGAGAGGAAAATAGCGCTGACACTGGAGAGAATGAGAACAAAAATACCATTGACAAGTTGGACCGTGGCAAGGCAGTTGAGAAATCATCAAATCATGATGGTGGAAATGAAAGACCTGAATCTCTAATGGGGTTAAGTGGGGCTTTGTCTCTGCAAAAGAATGCTTACAATCCGCTGGTTCCATTCTTGTCTGCACCACTTTTGACTGCTTATAATACCATCGATCCCTTAGTAGATCCTCTTCTCTGGACGTCTCTTGTTCCTATGCTTCCTGCTGGCTTTCCCCACAACGCCGAGGTTACAAAGACTGAGGCCAGTTCATCTTATACCGTCTTTCAGTCTGACGGTTGA 1275 0.4361 MASSSSDPPSKFELGSSMALSSEAATTSDQVFLYRDFKKPKKERGCTAKERISKMPPSTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYTRDLEEMQNFSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGRMAGSDYFDSLHYGTGDDSAAKSEYLSGFSVDRKIDLTSYIKWWGSNKSRQADAGMKSSEEKKCGFAGDHCSELRTLEQQVQPTEPYQMPQLGTSHDEKKHKNSSVSALSILSRSAAYKSLLEKASKREENSADTGENENKNTIDKLDRGKAVEKSSNHDGGNERPESLMGLSGALSLQKNAYNPLVPFLSAPLLTAYNTIDPLVDPLLWTSLVPMLPAGFPHNAEVTKTEASSSYTVFQSDG 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1897 424 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Mibi06g1897 424 PRINTS Ethylene responsive element binding protein signature 114 134 IPR001471 GO:0003700|GO:0006355
Mibi06g1897 424 Gene3D AP2/ERF domain 66 134 IPR036955 GO:0003700|GO:0006355
Mibi06g1897 424 MobiDBLite consensus disorder prediction 44 63 - -
Mibi06g1897 424 Pfam AP2 domain 66 124 IPR001471 GO:0003700|GO:0006355
Mibi06g1897 424 MobiDBLite consensus disorder prediction 304 343 - -
Mibi06g1897 424 SUPERFAMILY DNA-binding domain 65 134 IPR016177 GO:0003677
Mibi06g1897 424 MobiDBLite consensus disorder prediction 261 286 - -
Mibi06g1897 424 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 35 310 - -
Mibi06g1897 424 SMART rav1_2 66 138 IPR001471 GO:0003700|GO:0006355
Mibi06g1897 424 FunFam AP2-like ethylene-responsive transcription factor 65 134 - -
Mibi06g1897 424 ProSiteProfiles AP2/ERF domain profile. 66 132 IPR001471 GO:0003700|GO:0006355
Mibi06g1897 424 MobiDBLite consensus disorder prediction 304 349 - -
Mibi06g1897 424 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1897 Mibi-ChrMibi06 39458650 39462041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1897 28 408 AP2-EREBP Transcription Factor Family AT2G41710 62.887 9.24e-155 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi06g1897 AP2 1.1e-13 CL0081